Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g02831 ATGTGGCGGTCGGCGATTTCAGAACGACAAAGGGCATTCTCGAAGCTTCTATTCGCCTTCACAGTGTCCTGCAACATGGGCGGCGGCCCTCGAACCTTCCCCGGCGGCGTCAACAAGTGGAAGTGGAAGCGCATGCACGAGAAGCGCGCCCGTGACAAAGAGAAGAGACTTCTCGAACATGAGAAACAGATCTATCAGGCTCGCATTCGCTCCCACATACGCTCCCACCTCGCACCCGACAACTCAACCGCCACCGCCGCCACCACCCACGGCCCTATCTCCCCCACTGACCACATTAGGGCCCTCGCCAACCGCTTCATGAAGGAAGGAGCTGAAGATCTCTGGAACAACGACGACGGTCCCCTAACGGTTTCTTCTTCTTCTTGTTCTTCTCCCACGCGGCAGCAAGGTTCGATTGAGGCGCCGGTGGATTTGCGGAAGCTGATACAAGAGAAACGGAACCCCAATTCAATGAATTCGAGTGGGAATTTCGGTCAGAGGAGGGGTTACCATTCTGTTTCTGAGGTGAATTCCGGTGTTGGTAGCAGTAAGAAACTTGCGCCTGCTGGGAGGAGAAGATTTTGGAGGAACGATAGTACTTCTTCGAGTGAGAGTGAATCCGAGGATGAGAACGATTCGAGGGTTAATAATTGGGATGTTAGGAAGATGGGTAGTAATGCGTCTTTGAGGAAGCATGATTTGAAGAGGGAGAGGAGAGTGATGCCAAAACCATATGATGAAGAGGCTGATTTTGCAGAACAGGTTGAGCTGATTAAGTATGAGATTAACAAGAGGAAGTTGAAACAGAAGGAAATGGAAGAGTACAGGGTTGAGGACCAAGAATCCATCCTAACCCAATCAAGATTTGATGAGTGCGGTATATCGCCATTGACAGTCAAGGCTCTCTCTTCAGCTGGTTATATCCACCTGACCCGGGTGCAAGAGGCAAGCCTTTCTGTTTGCCTTGAGGGTAAGGATGCTCTGGTCAAAGCTAAAACTGGCACGGGAAAAAGTGCAGCATTTTTGCTTCCTGCCATTGAAACAGTTTTGAAAGCTATGAATAGCAAGTCGCGTCAAAATGTGCCACCTATATTTGTTCTTATTCTCTGCCCTACCAGAGAACTTGCCAGTCAAATTGCTGCTGAAGCAAAGGCTTTGCTCAAGTATCAAGATGGCATTGGTGTACAAACTCTCGTAGGAGGGGTGCGATTTAAAGTTGACCAAAAGCGTCTTGAATCCGATCCATGCCAGATACTTGTTGCTACCCCTGGTAGGTTGCTAGATCATATTGAGAATAAGTCTGGACTATCTGTGCGATTGATGAGCTTGCAGATGCTTGTACTTGATGAAGCTGATCATTTACTGGACCTTGGATTTCGAAAGGACGTAGAAAAGATTGTTGACTGTGTGCCTCGTCAAAGGCAATCCTTGATGTTTTCTGCAACCATCCCAAAGGAGGTCCGCCGTGTATCTCAACTTGTTTTGAAAAGGGAACATGCATACATTGATACAGTTGGTATGGGTTGTCTGGAAACTCCAGTCAAGCAATCTTTTCTTATTGCTCCACAGGAATCACATTTTCAAATAGTACACCATATTTTAAAGGAGCATGTCATGCAAACACCTGATTATAAGGTTATTATTTTCTGTGTTGCTGGAATGGTAACATCACTTATGTATCAACTTCTCCGTGAAATGAAAATGAACGTGAGGGAGCTACACTCTCGAAAACCCCAACTGTATCGAACTCGCATATCAGATGAGTTTCGGGAATCCAAACAACTGATTCTTGTCTCATCTGATGTTTCATCTCGTGGAATGAATTATCCCGATGTTACTTTAGTCATACAGGTGGGTATTCCTTCTGATCGTGAACAATATATACATCGTCTTGGAAGAACTGGACGGGAAGGCAAAGAAGGGGAAGGCATATTGTTGATTGCTCCATGGGAAGAATATTTTTTAGATGAAATCAAGGATCTTCCTCTAGAGAGATTCCCTTTTCCAGATATAGATCCACAGACAAAGCTTAAGATAGAACATTCCATGGGAAAGATAGACAGTGACGTCAAAGAAGCCGCATATCATGCTTGGCTGGGTTATTACAACTCAATTAGGGAAATTGGAAGGGAGAAGTCCACCATAGCTGAGCTTGCAAACCGGTTTTCTGCATCAATTGGTTTACAGAGGCCTCCTGCGCTCTTTCGAAAGACTGCTTTAAAGATGGGTTTGAAAGACATTCCTGGCATTAGAATTCGTCGATAA 2265 0.4574 MWRSAISERQRAFSKLLFAFTVSCNMGGGPRTFPGGVNKWKWKRMHEKRARDKEKRLLEHEKQIYQARIRSHIRSHLAPDNSTATAATTHGPISPTDHIRALANRFMKEGAEDLWNNDDGPLTVSSSSCSSPTRQQGSIEAPVDLRKLIQEKRNPNSMNSSGNFGQRRGYHSVSEVNSGVGSSKKLAPAGRRRFWRNDSTSSSESESEDENDSRVNNWDVRKMGSNASLRKHDLKRERRVMPKPYDEEADFAEQVELIKYEINKRKLKQKEMEEYRVEDQESILTQSRFDECGISPLTVKALSSAGYIHLTRVQEASLSVCLEGKDALVKAKTGTGKSAAFLLPAIETVLKAMNSKSRQNVPPIFVLILCPTRELASQIAAEAKALLKYQDGIGVQTLVGGVRFKVDQKRLESDPCQILVATPGRLLDHIENKSGLSVRLMSLQMLVLDEADHLLDLGFRKDVEKIVDCVPRQRQSLMFSATIPKEVRRVSQLVLKREHAYIDTVGMGCLETPVKQSFLIAPQESHFQIVHHILKEHVMQTPDYKVIIFCVAGMVTSLMYQLLREMKMNVRELHSRKPQLYRTRISDEFRESKQLILVSSDVSSRGMNYPDVTLVIQVGIPSDREQYIHRLGRTGREGKEGEGILLIAPWEEYFLDEIKDLPLERFPFPDIDPQTKLKIEHSMGKIDSDVKEAAYHAWLGYYNSIREIGREKSTIAELANRFSASIGLQRPPALFRKTALKMGLKDIPGIRIRR 754
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g02831 754 PANTHER RNA HELICASE 29 753 - -
Adu03g02831 754 Gene3D - 253 502 IPR027417 -
Adu03g02831 754 Pfam Helicase conserved C-terminal domain 533 637 IPR001650 -
Adu03g02831 754 SMART ultradead3 306 517 IPR014001 -
Adu03g02831 754 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 364 655 IPR027417 -
Adu03g02831 754 Pfam DEAD/DEAH box helicase 311 489 IPR011545 GO:0003676|GO:0005524
Adu03g02831 754 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 238 471 IPR027417 -
Adu03g02831 754 MobiDBLite consensus disorder prediction 152 181 - -
Adu03g02831 754 CDD SF2_C_DEAD 514 647 - -
Adu03g02831 754 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 318 501 IPR014001 -
Adu03g02831 754 MobiDBLite consensus disorder prediction 197 217 - -
Adu03g02831 754 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 533 679 IPR001650 -
Adu03g02831 754 PANTHER DEAD-BOX ATP-DEPENDENT RNA HELICASE 33-RELATED 29 753 - -
Adu03g02831 754 MobiDBLite consensus disorder prediction 119 138 - -
Adu03g02831 754 Coils Coil 43 63 - -
Adu03g02831 754 SMART helicmild6 557 638 IPR001650 -
Adu03g02831 754 Gene3D - 511 732 IPR027417 -
Adu03g02831 754 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 287 315 IPR014014 GO:0003724
Adu03g02831 754 MobiDBLite consensus disorder prediction 112 221 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g02831 Adu-Chr3 106870974 106874284 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g02831 278 663 Eukaryotic Initiation Factors Gene Family AT3G19760 26.303 5.31e-42 156
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g02831 - - lang:109349967 1140.56