Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g02824 ATGTGTGGCATAGCGATAGCGCGAATCAGTCCGAGGCATTTCTTGTTCTGGTTTCGGTCTCACACTGCTAAGGAAGTTAAGTGGGGAGGGGCCAAACACCATCTTGAGGATAAGGATGATGGAGGGAAAATGAATCCAAGATCATTATTCAAAGCATTTCTTGAAGTTGTTAAGAGCAAAAGTTTGCCTTGGGAGGCTTCCGAAATCAATTCTATTCACTCATTGCAACTTATAATTAGAGAATCATTTCACAATTCAGAGAATAGTAGTATTAAGGCTATGAACTACATATATAGAGAAGTGATGCTGGGATTGATGAGCTAA 324 0.3981 MCGIAIARISPRHFLFWFRSHTAKEVKWGGAKHHLEDKDDGGKMNPRSLFKAFLEVVKSKSLPWEASEINSIHSLQLIIRESFHNSENSSIKAMNYIYREVMLGLMS 107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g02824 107 Pfam Phytochrome region 2 86 IPR013515 GO:0006355|GO:0009584
Adu03g02824 107 Gene3D - 1 88 IPR043150 -
Adu03g02824 107 PANTHER TWO-COMPONENT HISTIDINE KINASE 1 98 - -
Adu03g02824 107 PRINTS Phytochrome signature 13 32 IPR001294 GO:0006355|GO:0009584
Adu03g02824 107 PRINTS Phytochrome signature 46 64 IPR001294 GO:0006355|GO:0009584
Adu03g02824 107 PANTHER PHYTOCHROME 1 98 - -
Adu03g02824 107 SUPERFAMILY GAF domain-like 2 83 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g02824 Adu-Chr3 106690505 106690828 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g02824 1 95 Histidine Kinase Gene Family AT2G18790 68.421 9.85e-43 146
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g02824 K12123 - gmx:100800339 165.236