Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g02820 ATGAAGCTATACACTTCATTGTTGTTTCTGGGTTTGATTTCCACGCTGTCTTTTGTAGCTTCTGATACGGTGGCAAAAAATGAAGTTTCGGCGCTTCAAACCTTCAGAGAAGCTATCTTTGATGATCCACATCTTGTTTTGTCCAATTGGAATACCCTGGTTTCGGATCCTTGTGAGTGGAATGGTGTTTTGTGCAATGGACCTCGAGATCATGTCATCAAGCTAAACATATCAGGGTCAGCCTTAAGAGGGTTTCTTGCACCAGAATTGGGGCAAATCACCTACTTGCAAGAACTAATCTTGCACGGAAACAATCTTATTGGAACAATACCAAAAGAATTGGGCATGTTGAAATCTCTCAAGGTGTTGGACTTGGGGTTGAATCAGTTATCAGGACCGATTCCTCGAGAAATTGGAAATTTGACCCAAGCAGTGAAAATAAACCTGCAGTCCAATGGGTTGACTGGTAGGCTACCCCCAGAGCTTGGAAATTTGAAATACCTTCAAGAACTTCGGTTGGATAGGAATAAGCTTCAAGGACCTGTTCCTGCTGGTGGAAGTTCTGATTCAACTATGCATGAGATGTATGCCTCAAATGTGAATTTAACTGGCTTGTGTCGTACGTCTCAATTAAAAGTTGCAGATTTTTCATATAACTTCTTTGTTGGGAGCTTACCCAAATGTTTGCGTGTTCCAAGATCAAGCTTTCAAGGGAATTGCCTTCAGATTAAAGACATAAAGCAGCGGACTTCTGTACAATGTGCTGGTGCTTCACCTGCCCAGAGCCATCCAGTAATGAACCTAAAGCATCGAGCTGCTGAACATGTGTCGAAGCATCAAAGAGCATCAAAACCTTCCTGGCTTTTGGCTCTAGAGATAGCGACGGGAGTCATGGTTGGTTGTCTCTTTTTGATTGCTATTTTCACGGCGTATCAGAGGTTTAACAGCAAATCATCTATCATCATTCCTTGGAAAAAATCTTCAAGCGAGAAAGAGCATATGACAGTATATATAGAATCTGATGTGTTGAAAGATGTGACGAAGTATAGCAGACAAGATCTTGAAGTGGCCTGCGAAGACTTCAGCAACATAATTGGTTCTTCACCAGATAGTGTGGTCTACAAGGGTACAATGAAAGGTGGACCCGAGATTGCTGTAATTTCCCTCTGCATTAAGGAAGAGCATTGGACGGGTTACCTTGAGCTCTATTTTCAGAGAGAGGTGGCAGACTTGGCAAGGTTGAATCATGAGAATACAGGAAAACTGCTAGGTTATTGTAGAGAGAGCAATCCTTTTACCAGGATGCTGGTTTTTGATTATGCTTCAAATGGGACACTCTATGAGCACCTACATTGCTATGAAGAAGGGTGCCAATTGTCTTGGACACGGCGTATGAAAGTTATTATAGGCATTGCTCGTGGACTCAAGTATTTGCACACAGAAATTGAACCACCATTCACTATCTCAGAGTTGAATTCCAATGCTGTATATCTTACAGAAGACTTTTCACCAAAGCTGGTCGATTTTGAAAGTTGGAAGACAATTCTTGAAAGATCAGAGAAGAATTCTGGTTCCATTGGCAGCCAGGGCTCCATGTGCCTTCTTTCAAATTCCGTGGAGGCACGTCGTCTTGACACCAAAGGAAACATATACGGCTTTGCAGTACTTCTACTGGAAATAATCAGCGGACGACCTCCGTATTGCAAGGACAAAGGGTACTTGGTGGACTGGGCTAGGGAATATCTTGAGATACCGGAAATGATGTCAAGTGTGGTGGATCCAGAGTTAAAACATTACAGAGAAGACGACTTGAAAGTAATATGTGAGGTGGTATCTCAATGCATCAATGGTGACCCCAACGGCCGTCCGTCAATGCGGGAATTATGTAGCATTCTGGAGGGCAGAATTGACACTTCAATTAGCGTGGATCTCAAGGGATCATCTTTGGCTTGGGCTGAACTTGCCCTTTCATCTTAG 1977 0.4289 MKLYTSLLFLGLISTLSFVASDTVAKNEVSALQTFREAIFDDPHLVLSNWNTLVSDPCEWNGVLCNGPRDHVIKLNISGSALRGFLAPELGQITYLQELILHGNNLIGTIPKELGMLKSLKVLDLGLNQLSGPIPREIGNLTQAVKINLQSNGLTGRLPPELGNLKYLQELRLDRNKLQGPVPAGGSSDSTMHEMYASNVNLTGLCRTSQLKVADFSYNFFVGSLPKCLRVPRSSFQGNCLQIKDIKQRTSVQCAGASPAQSHPVMNLKHRAAEHVSKHQRASKPSWLLALEIATGVMVGCLFLIAIFTAYQRFNSKSSIIIPWKKSSSEKEHMTVYIESDVLKDVTKYSRQDLEVACEDFSNIIGSSPDSVVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARLNHENTGKLLGYCRESNPFTRMLVFDYASNGTLYEHLHCYEEGCQLSWTRRMKVIIGIARGLKYLHTEIEPPFTISELNSNAVYLTEDFSPKLVDFESWKTILERSEKNSGSIGSQGSMCLLSNSVEARRLDTKGNIYGFAVLLLEIISGRPPYCKDKGYLVDWAREYLEIPEMMSSVVDPELKHYREDDLKVICEVVSQCINGDPNGRPSMRELCSILEGRIDTSISVDLKGSSLAWAELALSS 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g02820 658 Gene3D Phosphorylase Kinase; domain 1 321 440 - -
Adu03g02820 658 Pfam Leucine rich repeat N-terminal domain 26 66 IPR013210 -
Adu03g02820 658 Gene3D Ribonuclease Inhibitor 142 270 IPR032675 -
Adu03g02820 658 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 5 658 - -
Adu03g02820 658 ProSiteProfiles Protein kinase domain profile. 359 640 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu03g02820 658 Gene3D Ribonuclease Inhibitor 27 141 IPR032675 -
Adu03g02820 658 Gene3D Transferase(Phosphotransferase) domain 1 441 644 - -
Adu03g02820 658 Pfam Leucine rich repeat 95 154 IPR001611 GO:0005515
Adu03g02820 658 Pfam Protein tyrosine and serine/threonine kinase 363 631 IPR001245 GO:0004672|GO:0006468
Adu03g02820 658 SUPERFAMILY L domain-like 27 231 - -
Adu03g02820 658 PANTHER PROTEIN MALE DISCOVERER 2 5 658 - -
Adu03g02820 658 SUPERFAMILY Protein kinase-like (PK-like) 340 633 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g02820 Adu-Chr3 106399622 106404417 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g02820 42 637 Receptor kinase-like Gene Family AT5G45780 27.961 9.59e-54 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Adu03g02820 PK_Tyr_Ser-Thr 1.6e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g02820 - - gmx:100781978 1055.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu05g01052 05 14148773 14152139 Adu03g02820 03 106399622 106404417 PCT