Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g02805 ATGGATGGGAGAGAAGCCATGGCATTTACTAGTGGGTCTTCTCCATTTTACGTGCATAGAGAGAGTGGAGGGTTCCAAGGATCTCCAGGATTCAGAGCTTTGTCAAACACTGCCGTTCAATCTCAGTCAAATGCAAAGGGTGGCGGAGGCGGCTCTGTTGGTTCTAATTCCTCATTTGCATTACAGGTTCAACCTCAAGCACAGGCTCGTGCCGGTTTTAGTCATGGCATTGGCATTGGTGCCTCATCTTCTGGTGGTGGAGTGCCTCCTTCTTCCTCAGGTGAGCCTGTGAAGAAGAAGAGAGGGAGACCCCGCAAGTATGGCCCGGAAGGACCAGGACCAGTTTCTTTGAGACTTTCATCAATGTCTGCCCCCGCTTGTTGGAATGCTGGTTCAACCTCTGATTCCCAGAAAAGGGGTAGAGGACGCCCTCCGGGATCTGGAAGGAAACAACAGCTGGCTACTCTTGGTGAATGGATGAATAGTTCTGCAGGGCTGGCTTTTTCACCTCATGTAATCTCCATTGGAGTAGGGGAGGACATTGTAGCAAAGCTATTGTCGATATCACAGCAGAGACCACGGGCACTCTGCATCATGTCGGGTACTGGGATAGTTTCTCTAGTTACTCTCAGGCAGCCTGCTTCTACTAACAACAGTGTCACGATTGAGGGCCGATTCCAAATATTGTGTTTATCTGGTTCTTACTTGGTTGCTGAAGATGGTGGACCGTCCAATAGAACAGGTGGCATAAGTGTTTCCCTTTCTAGCTCCGACGGCCGTGTTATTGGTGGTGGTGTTGCAGTGCTTATTGCTGGAAGCCCAGTGCAGGTGGTAGTATGCAGTTTTGTATATAGTGGTAGCTCTAAGACCAAGCCCACGCAAGCTACCCTCATGAAAGAAGAGAGTTCCGAGCCTCAGCGCAATGACAAGTTAGCTTCTTTGGCCAGTGCTCCGCATAGTCAAAACTACATCCCTTCTGCTACAGGCATTTGGCCTGGATCACGACCTGCTGATCTCAAGAGCGTGCACGGACACACTGGCATTGACTTGACACGTGGTTGA 1062 0.5009 MDGREAMAFTSGSSPFYVHRESGGFQGSPGFRALSNTAVQSQSNAKGGGGGSVGSNSSFALQVQPQAQARAGFSHGIGIGASSSGGGVPPSSSGEPVKKKRGRPRKYGPEGPGPVSLRLSSMSAPACWNAGSTSDSQKRGRGRPPGSGRKQQLATLGEWMNSSAGLAFSPHVISIGVGEDIVAKLLSISQQRPRALCIMSGTGIVSLVTLRQPASTNNSVTIEGRFQILCLSGSYLVAEDGGPSNRTGGISVSLSSSDGRVIGGGVAVLIAGSPVQVVVCSFVYSGSSKTKPTQATLMKEESSEPQRNDKLASLASAPHSQNYIPSATGIWPGSRPADLKSVHGHTGIDLTRG 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g02805 353 Pfam Plants and Prokaryotes Conserved (PCC) domain 170 283 IPR005175 -
Adu03g02805 353 MobiDBLite consensus disorder prediction 29 69 - -
Adu03g02805 353 CDD DUF296 170 282 IPR005175 -
Adu03g02805 353 SUPERFAMILY AF0104/ALDC/Ptd012-like 167 284 - -
Adu03g02805 353 Gene3D - 170 301 - -
Adu03g02805 353 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 7 353 IPR039605 GO:0003680
Adu03g02805 353 PANTHER AT HOOK MOTIF DNA-BINDING FAMILY PROTEIN 7 353 - -
Adu03g02805 353 MobiDBLite consensus disorder prediction 122 140 - -
Adu03g02805 353 MobiDBLite consensus disorder prediction 1 151 - -
Adu03g02805 353 ProSiteProfiles PPC domain profile profile. 162 303 IPR005175 -
Adu03g02805 353 SMART AT_hook_2 98 110 IPR017956 GO:0003677
Adu03g02805 353 SMART AT_hook_2 138 150 IPR017956 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g02805 Adu-Chr3 105562743 105564550 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g02805 1 353 AT-hook Motif Nuclear Localized (AHL) Family AT1G63470 46.565 5.12e-86 263
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g02805 - - gmx:100798706 436.802
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu03g02805 03 105562743 105564550 Adu03g02805 03 105562743 105564550 ECH
Adu05g01057 05 14202670 14205862 Adu03g02805 03 105562743 105564550 PCT