Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g02788 ATGTTGACGGAGAACTTCAAAGAACAGCTTGCTTTGTCTGTTAGAAGCATCCAGTGGAGCTATGCAATATTCTGGTCTACTTCATCTACCCAACCCGGGGTGTTGAGTTGGGGGGAAGGATATTACAATGGAGACATTAAGACAAGGAAGACAAGTCAAGGAGTGGAACTCAATTCTGATCAGATAGGGTTGCAGCGGAGTGAGCAGCTTCGAGAGTTATACAAGTCCCTCAAAACTGTAGAAGCCAGCCCTCAAACCAAAAGGCCTTCAGCAGCACTGTCTCCGGAGGATCTCACAGATACAGAATGGTACTATTTGGTTTGCATGTCCTTTGTATTCAACATTGGCCAAGGGTTACCAGGAAAGGCTCTTGCAAAAGGTGAACCAATTTGGCTGTGTGATGCTCCTTCTAGTGATTGTAGAGATTTTAGTCGCTGTCTTCTGGCTAAGAGTGCATCCATTCAGACAGTGGTGTGCTTTCCTTTTATGGATGGGGTCATTGAGCTGGGTACAACTGATTATGTCTCAGAAGATCTCAGTCTCATTCAACAGATCAGAACTTCCTTCTTGGATATTCTTGATGTCGGTGTTCATAATGTACATGGAGCATTTAATGCGAAACAATCTCAAGAAGTAGGAGGTGCATTAATCAGCATAACTTCTCCTAATAACAGTTCAAATGCATTTCAAGCCAATCAACCACCAGATGAAACATTCATGGTTGAAAGGATAAATAATGGCACCTCTCAAGTCCAAAGTTGGCAAATTATGGATGATGAATTGAGCAATGCTGTTCATAATTCTAGTGACTGCGTATCTCAAACTCTTCACAGTCCTGAGAACGTTGCTTCTCTTCCAAAGGGTGAAAACCTCACTGATAGTGCCAAAGACCTTCAAAAGTGCAATAACTCAAAAATGACATTAGTTGATCCTCGAAGCGATGATTGGCATTATCAGATGGTTCTTTCTACCCTTCTAAAAAGCTCAGACCAGTTAATCATGGGGATGCATTTTCAAAATTTTCATCAGGAATCAAGCTTTACAAGTTGGAAGAAAGCTGGGTCAGTGAGCTACCAAAGGCCAAGAACTGGAGGAAGCTCACAAGCTTTATTGAAGAAGGTATTGTTTGAAGTTCCTCGGATGCACTTGGATGGGATACTTGAGTATCAAGAAGAGAATGACTTTAAGGAAGCAGTGAGAACAGAAGCTGATGAAAATGGCATGAACCATGTTTTGTCAGAGAGAAGGAGAAGAGCAAAACTAAATGAAAGGTTTTTAACCCTTAGATCAATGGTCCCTTCAATTACTAAGGATGACAAAGTTTCGATACTAGATGATGCAATAGAATACCTTAGAAAGCTTGAAAAAAGGATAAAAGAGTTGGAAGCTCATAAGGATCTAACAGACAGAGAGGCTAGAACTAAAAGATCACCTCAAGATATGGTGGAGAGGACTTCTGATAATTATTTTAACAAAACGGATAACGGCAATAAATCGATGGCGAAAAAGAGGAAGTCTCGGGACATAGATGACACAAGGCCAGAGATTAATTCAGAATCTTTACTAAAAGGAAGTTCTACTAATGATGTTGCTGTTAACATCAATGAGAATAATGAAGTTGTGATTGAAATGAAATGCCCTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGATTGAATTTTCATTCAGTTCAGTCCAGCGAAGTTGA 1752 0.387 MLTENFKEQLALSVRSIQWSYAIFWSTSSTQPGVLSWGEGYYNGDIKTRKTSQGVELNSDQIGLQRSEQLRELYKSLKTVEASPQTKRPSAALSPEDLTDTEWYYLVCMSFVFNIGQGLPGKALAKGEPIWLCDAPSSDCRDFSRCLLAKSASIQTVVCFPFMDGVIELGTTDYVSEDLSLIQQIRTSFLDILDVGVHNVHGAFNAKQSQEVGGALISITSPNNSSNAFQANQPPDETFMVERINNGTSQVQSWQIMDDELSNAVHNSSDCVSQTLHSPENVASLPKGENLTDSAKDLQKCNNSKMTLVDPRSDDWHYQMVLSTLLKSSDQLIMGMHFQNFHQESSFTSWKKAGSVSYQRPRTGGSSQALLKKVLFEVPRMHLDGILEYQEENDFKEAVRTEADENGMNHVLSERRRRAKLNERFLTLRSMVPSITKDDKVSILDDAIEYLRKLEKRIKELEAHKDLTDREARTKRSPQDMVERTSDNYFNKTDNGNKSMAKKRKSRDIDDTRPEINSESLLKGSSTNDVAVNINENNEVVIEMKCPXXXXXXXXXXXXXXXXXXXXXXXXXIEFSFSSVQRS 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g02788 583 Gene3D - 101 172 IPR029016 -
Adu03g02788 583 MobiDBLite consensus disorder prediction 497 517 - -
Adu03g02788 583 Coils Coil 444 471 - -
Adu03g02788 583 MobiDBLite consensus disorder prediction 469 524 - -
Adu03g02788 583 PANTHER TRANSCRIPTION FACTOR EGL1 5 547 - -
Adu03g02788 583 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 7 189 IPR025610 -
Adu03g02788 583 Pfam Helix-loop-helix DNA-binding domain 409 455 IPR011598 GO:0046983
Adu03g02788 583 PANTHER TRANSCRIPTION FACTOR TT8 5 547 - -
Adu03g02788 583 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 408 471 IPR036638 GO:0046983
Adu03g02788 583 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 405 454 IPR011598 GO:0046983
Adu03g02788 583 SMART finulus 411 460 IPR011598 GO:0046983
Adu03g02788 583 Gene3D - 397 472 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g02788 Adu-Chr3 104053682 104057301 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g02788 4 546 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G41315 47.692 2.93e-164 481
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Adu03g02788 bHLH-MYC_N 6.3e-52 CL0161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g02788 - - ahf:112732736 1061.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu03g02788 03 104053682 104057301 Adu03g02788 03 104053682 104057301 ECH