Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g02772 ATGGCGTTGTACGTGCTATCTCGCCGTTCATCACATCCCTCCACTTCCCAATTCTTCCTCGCTCTCCGTTTCGCCGCATCCTATTCCAGATCCTATTCCTCTTCCTCCTTCAGGGAAGAAAGAGACACCTTTGGACCCATTCAAGTTCCTTCCGACAAATTATGGGGAGCTCAAACTCAAAGATCCCTCCAGAATTTCGATATCGGTGGCCCCCGTGAACGCATGCCTGAACCCATCGTTCGTGCCTTCGGCATCTTGAAAAAATGCGCTGCTAAGGTGAACATGGAGTACGGTCTTGATCCCACGATTGGGAAGGCAGTGATGCAAGCAGCTCAAGAAGTGGCAGAGGGCAAGTTAAATGACCATTTTCCCCTTGTTGTTTGGCAAACTGGCAGTGGCACGCAGAGTAACATGAATGCTAATGAGGTTATTGCTAACAGAGCGGCAGAGATTCTTGGTCATAGGCGGGGCGAAAAGTTTGTGCACCCAAATGACCATGTCAACAGATCACAATCTTCCAATGATACTTTCCCAACTGTAATGCACATTGCAGCTGCCATGGAAGTAAACTCAAGACTAATCCCCAATTTGAAAACCTTATATTCTACACTAAATGCGAAGTCAATCGAATTCAAGGATATTGTCAAGATTGGACGCACTCATACTCAGGATGCAACACCTTTGACACTTGGACAGGAGTTTAGTGGGTATACTACTCAAGTGAAGTATGGCATTGATAGAGTGATTGGCACTTTGCCACGAATGTATCAGCTAGCGCAGGGTGGTACAGCTGTAGGGACTGGATTGAATACAAAGAAAGGGGCGTCCGAACCAAGCAATGTCCACCACAACCCGGCTCAAGGAACTTATGAAGAGGCAGCATCCGTGGATGACATTCGTGCTCTAATCGCTGACGCAGAAGGCAACGTGCCGGAACGCGTCTCCATTGCGGAGCGAATGAGGCAGGAATGGTGGGCAGCAGAAAACCCTGACGAGGGTTCAAGGCATCCCCGCGCCTGCATTTCGAGCAACCTAATGAAACAATATTTTCTCTTCGTAGCCGACGAGATCATTATGGATCGTGATTGGAGCAAGGTTGGATTGGCATTGGCCTGTGGCAATACTATTGTTCTCAAAACCGCTGAGCAAACACCATTGTCTGCTTTGTACGCAGCAAAACTATTTCATGAGGTGGACATATTCTCTGTTAATGGAACCATGCTCATTTGGTTTGGAAGATATAAAGAGGCGTAG 1254 0.4761 MALYVLSRRSSHPSTSQFFLALRFAASYSRSYSSSSFREERDTFGPIQVPSDKLWGAQTQRSLQNFDIGGPRERMPEPIVRAFGILKKCAAKVNMEYGLDPTIGKAVMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHRRGEKFVHPNDHVNRSQSSNDTFPTVMHIAAAMEVNSRLIPNLKTLYSTLNAKSIEFKDIVKIGRTHTQDATPLTLGQEFSGYTTQVKYGIDRVIGTLPRMYQLAQGGTAVGTGLNTKKGASEPSNVHHNPAQGTYEEAASVDDIRALIADAEGNVPERVSIAERMRQEWWAAENPDEGSRHPRACISSNLMKQYFLFVADEIIMDRDWSKVGLALACGNTIVLKTAEQTPLSALYAAKLFHEVDIFSVNGTMLIWFGRYKEA 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g02772 417 Gene3D Fumarase/aspartase (Central domain) 171 298 - -
Adu03g02772 417 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 363 415 IPR016162 GO:0016491
Adu03g02772 417 SUPERFAMILY ALDH-like 294 399 IPR016161 GO:0016491
Adu03g02772 417 PANTHER ASPARTATEAMMONIA/ARGININOSUCCINATE/ADENYLOSUCCINATE LYASE 20 275 IPR005677 GO:0004333|GO:0006106|GO:0045239
Adu03g02772 417 Pfam Lyase 45 274 IPR022761 -
Adu03g02772 417 Pfam Aldehyde dehydrogenase family 365 399 IPR015590 GO:0016491
Adu03g02772 417 SUPERFAMILY L-aspartase-like 37 274 IPR008948 GO:0003824
Adu03g02772 417 PRINTS Fumarate lyase superfamily signature 167 185 IPR000362 -
Adu03g02772 417 PRINTS Fumarate lyase superfamily signature 213 231 IPR000362 -
Adu03g02772 417 Gene3D - 38 170 IPR024083 -
Adu03g02772 417 PANTHER FUMARATE HYDRATASE, MITOCHONDRIAL 20 275 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g02772 Adu-Chr3 103124487 103130295 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g02772 365 400 Aldehyde Dehydrogenase Gene Family AT3G48000 77.778 5.94e-10 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g02772 K01679 - gmx:100819617 474.167