Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g02756 ATGTCTTCTGGTCTGTATTCATTTGAAACCACTTTCCAAGCACATTCAAGCTCAGACATGGTCACTGCTGATGGAGGAGACCTTGCTTTTCTCACTGACCCTTTTCCTTTCTTCGAAAACAGCACTACTAATAATGATATTGGTCAACACTGTTCGAGCAACCAAAGCATGTTCGATGAGGCTCTTTCTTCTTCTTCTGTTGACCCTTTTTCATCTTGCTTCTTTTCTTTCTCTCCTCCAAGTATTCACTTAGAAAACCTTAGCCTTCAGACCAACAACAAGAACAACCGTGTTGATCCCAATTTGGAGAGTGACTTTGCAAGTTTCTCATCGGGTTTTGATGTGACACAAGTAGTGAAGAGTGAGGAGTGCCAAATCGGTGTTGAATTTGATTATGGATATAATAATCATAATCACCAACACTTTTTTCCCCACAGTTATAGCGGTGCTGAGAATGTGGCAAAATACATGCAGAGGAGTTTCAGCAGCAACTCCTTTCATGGCAAACCTGGCAATTTTCTGTTCCAAAATAATCACTCTGACACACTGAACAACAACAATAATAATAACAACATGAAATCTCCAAGTTTTCAAAGGCATGATATGAATTCACCTGAAAACAGTGCCTTCAATGGACAAATGAGGAGGGTGTGCAGCACTGGAGATTTGCAGAAGTGTCAAAGGGAAGGATCATTGTTGGAGGAACCGAATTTCAAAGTAGGGCGTTATAGTGCCGAAGAAAGAAAAGAAAGAATATCAAAATATAGAGCCAAGAGAAGCCAGAGGAACTTCAACAAAACCATCAAGTATGCATGCCGAAAAACACTAGCCGACAATCGACCGCGCATACGTGGCAGATTCGCACGCAACGACGAGGAGCGCGACATTATTCCTATTCCAAATCACAAGGCTCCATGTTCAGCCCGAGATGATGAAGACGAAGAAGTCGATTTCTGGATTGAAGGGTTGCGGTTGCATGAAGAGCAGGAGGATGTAACAGTCAACGCTTATGGACCTAATCAGTTTCAGTACTTTCGTTTCTAA 1044 0.4195 MSSGLYSFETTFQAHSSSDMVTADGGDLAFLTDPFPFFENSTTNNDIGQHCSSNQSMFDEALSSSSVDPFSSCFFSFSPPSIHLENLSLQTNNKNNRVDPNLESDFASFSSGFDVTQVVKSEECQIGVEFDYGYNNHNHQHFFPHSYSGAENVAKYMQRSFSSNSFHGKPGNFLFQNNHSDTLNNNNNNNNMKSPSFQRHDMNSPENSAFNGQMRRVCSTGDLQKCQREGSLLEEPNFKVGRYSAEERKERISKYRAKRSQRNFNKTIKYACRKTLADNRPRIRGRFARNDEERDIIPIPNHKAPCSARDDEDEEVDFWIEGLRLHEEQEDVTVNAYGPNQFQYFRF 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g02756 347 PANTHER CCT MOTIF FAMILY PROTEIN 24 344 - -
Adu03g02756 347 ProSiteProfiles CCT domain profile. 248 290 IPR010402 GO:0005515
Adu03g02756 347 Pfam CCT motif 248 290 IPR010402 GO:0005515
Adu03g02756 347 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 24 344 IPR045281 GO:0009909
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g02756 Adu-Chr3 102664753 102666442 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g02756 244 292 C2C2-CO-like Transcription Factor Family AT5G57660 53.061 1.58e-10 59.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Adu03g02756 CCT 9.2e-18 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g02756 - - adu:107479916 675.626
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu05g01069 05 14351805 14353561 Adu03g02756 03 102664753 102666442 PCT