Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g02742 ATGGGTCACCATTCGTGCTGCAACCAACAGAAGGTTAAGAGAGGCCTTTGGTCCCCTGAGGAAGACGAGAAACTCATTCGTTACATTACCACTCATGGCTATGGCTGTTGGAGTGAAGTCCCTGAGAAAGCTGGGCTTCAAAGGTGTGGAAAGAGTTGTAGGCTGAGATGGATTAATTATTTGAGGCCTGATATTAGAAGAGGCAGGTTTACACCAGAGGAGGAGAAGTTAATCATAAGTCTCCATGGTGTCGTAGGCAATAGATGGGCGCACATTGCAAGCCACTTGCCTGGTAGAACTGACAATGAAATAAAGAACTACTGGAATTCGTGGATCAAGAAGAAGATAAGAAAGCCTTCTTCAGCGGCAACAAATAATGCATCTTCACAAACTAGTGTGGATCATTCTTCTCACTTCAGCTATAATAATTATACTAATTCCAATCAACTACTAGATCATCATCAAGATAATCTAACACCAAAGCAACCACTTCATCAAGAATCCTTGTTCTCTTCAACATACCCACTATTTATGTTTGACACTAGTTCACTAGATGGGACCACAACAGACAACAGTTTACGAGTTGATCAAATATTCCAAGATGCTAATGTTGGTTTGAGTTCTGAAACATGGAACTTGAGCCACCACCAGAACCCAGTTCAAGCACTTGCTGCTCCTCCATCAACAACTTTCGCAGTTGCTGTGGGATTGGACACAACCAACTATCTGCCGCCATTGATAGAGAACGTGGAGAGCATGGTACCGGTTGAGGTGCAATCTTGTAGCATGGAGGAGGTAGGAGATGGGGCTCTAGACTGCTTGCAATTGCAGAGGCAACAAGATCAGTTGAATGCATGGGTTGAATCCACACACCAACAATGTCCTAACTTTCTCTTTTGGGACAATGTTGAAGGCCCAATTGGTGGGGAACAAGAACTTGCACCAAATTCTTCATCAAATAAAACTAGTGCTCTTTCTCCTTTTCCTTTGTGA 993 0.432 MGHHSCCNQQKVKRGLWSPEEDEKLIRYITTHGYGCWSEVPEKAGLQRCGKSCRLRWINYLRPDIRRGRFTPEEEKLIISLHGVVGNRWAHIASHLPGRTDNEIKNYWNSWIKKKIRKPSSAATNNASSQTSVDHSSHFSYNNYTNSNQLLDHHQDNLTPKQPLHQESLFSSTYPLFMFDTSSLDGTTTDNSLRVDQIFQDANVGLSSETWNLSHHQNPVQALAAPPSTTFAVAVGLDTTNYLPPLIENVESMVPVEVQSCSMEEVGDGALDCLQLQRQQDQLNAWVESTHQQCPNFLFWDNVEGPIGGEQELAPNSSSNKTSALSPFPL 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g02742 330 PANTHER MYB DOMAIN PROTEIN 55 1 329 - -
Adu03g02742 330 CDD SANT 69 112 IPR001005 -
Adu03g02742 330 MobiDBLite consensus disorder prediction 312 330 - -
Adu03g02742 330 MobiDBLite consensus disorder prediction 308 330 - -
Adu03g02742 330 CDD SANT 17 61 IPR001005 -
Adu03g02742 330 Gene3D - 6 66 - -
Adu03g02742 330 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Adu03g02742 330 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Adu03g02742 330 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Adu03g02742 330 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Adu03g02742 330 MobiDBLite consensus disorder prediction 119 138 - -
Adu03g02742 330 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Adu03g02742 330 Gene3D - 68 139 - -
Adu03g02742 330 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Adu03g02742 330 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Adu03g02742 330 PANTHER MYB TRANSCRIPTION FACTOR 1 329 - -
Adu03g02742 330 SMART sant 13 63 IPR001005 -
Adu03g02742 330 SMART sant 66 114 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g02742 Adu-Chr3 101653404 101655020 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g02742 1 309 MYB Transcription Factor Family AT1G63910 49.858 5.59e-99 295
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Adu03g02742 Myb_DNA-binding 5.1e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g02742 K09422 K02947 gmx:100803556 446.432