Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g02722 ATGTCATTGATGGGAGAGGAAGAGATCATGGATGAATGTGAGTATGAGCATGAGGATAGTATTTTTTACGATGAGAAGTATCCTGATGATGAGTCATACTTAGATGAGTTGCAGCAGGAAGAAGAGTTGGGTGATGAGTTAGACGGTGAGGAGATTTTTGCAGAATTGACAGATTATGATTATAATGATGCATATGGATTGGATTCAATTGAGGATTTATTGAAACTTGACTTTTTAAGCATTGGTGAGGTTGAAGTTGACAAGTTTCACTTTGGAACCCTAGCCATTGCTTTTGAATTTTACAACAGATTTGCAAAGAGCCAAGGTTTCAGTGCAAGAAAAGACAAAAATTGGAAGAACTCAACCGACGAGACCTACATGCAGAGATTTGTATGTTTTCGGCAAGGATATCAATTAGAGAAGTGGTACACTTTGCCAAACAGAAAAAGGGAACCAAAGACCGAGACAAGAACTGGGGAATTTTATGCTGAATATGAATCTGCTCGTGGAGTTCCAGTTATGCAAACTTGTATTGAACCCCTTGAGATGTGTGCTGCTGATACTTACACAAGGGAGGTATTCTTTTTATTCAGGCCTATTCTTGTTCGGTCGGGTGCAATGAGAGTCGTGGATTACCAAACAAGAGACAATAGTATAATTTATTATGTTTGTAGGTATGCCAAACCAACAAAGGTGTGGGAGGTTGAGTGGGTGGATAATGGTAACCCAATCACTTGTTCATGCATGCGTATGGAATCATTCGGTATTCCCTGTGAACACATTATCTCTGTATTGGTCCGTAGGGATGTGCGCGAAATTCCTAAATGTCTAGTGTTGCATAGATGGACTAAGAAAGCAAAAGAATCTATGTCTGAGTCAAGTAGTTTTACAAGCGAATTACAAGTTAGCAATCGACTTTGTATCCTCAATGAGTGTGCTAGGATGATGTCAGAGGTTGCATGTGCTACTACAGAGAGGTTCCATGAAGCAAGGGATCTTATGCTTGATCTTTATAGCTCATACAAAGCACTAGATGAAGGGAACACGCCTTCGAAACCTAGATTGGGAGGTGGTACCAATCCTAAAGGGCATAGTGGTCGGAAAAAGCCCCAACATTGCAGTAATTGCAAGAAACCTGGTCATAATAAAACTTCTTGTTCAAAGCGCAATGAAAATGCTTTCAGTACACAAGGTAGCTCTACCGTCAAACTGATGCAATTTATGATGGTGAATGCATGGATGATGTGGAATACGAAACTCAAGAATGGTGGTGAACTTTGGGATTAG 1287 0.4017 MSLMGEEEIMDECEYEHEDSIFYDEKYPDDESYLDELQQEEELGDELDGEEIFAELTDYDYNDAYGLDSIEDLLKLDFLSIGEVEVDKFHFGTLAIAFEFYNRFAKSQGFSARKDKNWKNSTDETYMQRFVCFRQGYQLEKWYTLPNRKREPKTETRTGEFYAEYESARGVPVMQTCIEPLEMCAADTYTREVFFLFRPILVRSGAMRVVDYQTRDNSIIYYVCRYAKPTKVWEVEWVDNGNPITCSCMRMESFGIPCEHIISVLVRRDVREIPKCLVLHRWTKKAKESMSESSSFTSELQVSNRLCILNECARMMSEVACATTERFHEARDLMLDLYSSYKALDEGNTPSKPRLGGGTNPKGHSGRKKPQHCSNCKKPGHNKTSCSKRNENAFSTQGSSTVKLMQFMMVNAWMMWNTKLKNGGELWD 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g02722 428 ProSiteProfiles Zinc finger SWIM-type profile. 233 269 IPR007527 GO:0008270
Adu03g02722 428 SMART 26again6 244 271 IPR006564 GO:0008270
Adu03g02722 428 Pfam SWIM zinc finger 240 265 IPR007527 GO:0008270
Adu03g02722 428 Pfam FAR1 DNA-binding domain 99 159 IPR004330 -
Adu03g02722 428 MobiDBLite consensus disorder prediction 345 392 - -
Adu03g02722 428 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 179 354 IPR031052 GO:0006355
Adu03g02722 428 MobiDBLite consensus disorder prediction 377 392 - -
Adu03g02722 428 PANTHER - 179 354 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g02722 Adu-Chr3 99716366 99718826 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Adu03g02722 FAR1 1.2e-08 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g02722 - - ahf:112756534 375.941