Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g02714 ATGAAGAGGAAAGTAGCCAAGGATCAAATAGAGAGGCGCACAAAAGCAGAATGGGCAATATGTTTATGCAATAGTAGGGCTGAAGAAGTTGAATCAAGAATAAAGGAAGAAGTGAGCGCAAGGAAAGAAATTAAGAAAGAAGTGATGGCAAACAAAGAGCAGGACAAGAGGAGAAGAGAGAGGATTAATGAGCGACTAAGAACTCTACAGAGTCTTATTCCCAATGAAACAAAGATGACCATATTATATTTATATACACAAGTTGATATAAGAACAATGGTAGAAGAAGCAGTGCATTACGTGAAATTTTTGCAGCTACAGATCAAGGGTTTATTAGAGCCAGAGGTTCTTGGACCAGGATCAAATGCAGATTATGCCTGGGATGATCTGACTCTTCCACACAGGCCGGTTGTTTGCATCAACGTCATTTGTCCGGAGTGTTGCTCTTTGGTGCAcaaaattgtgatacacaatagcgccaacaacttgGCTAACACAAATTCTACTATCTGTCAACAACAACTTCCTCTTACAAGCTCTCAGACATCACCAGTAGCACCAACCCCATCCGTGCCTATATCTGCAGCACCTGTAAGGGCAGGCCAAGAGCCATTTAGACCACCAGCAAAAGTGTTAGGAAGGCCAGCCCAAGCTCTTAatagATACTCTCTTTGCATAAGGATATTGCAGGAGAAACAAGCAAACACGTTCTAA 714 0.3992 MKRKVAKDQIERRTKAEWAICLCNSRAEEVESRIKEEVSARKEIKKEVMANKEQDKRRRERINERLRTLQSLIPNETKMTILYLYTQVDIRTMVEEAVHYVKFLQLQIKGLLEPEVLGPGSNADYAWDDLTLPHRPVVCINVICPECCSLVHKIVIHNSANNLANTNSTICQQQLPLTSSQTSPVAPTPSVPISAAPVRAGQEPFRPPAKVLGRPAQALNRYSLCIRILQEKQANTF 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g02714 237 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 49 113 IPR036638 GO:0046983
Adu03g02714 237 SMART finulus 52 110 IPR011598 GO:0046983
Adu03g02714 237 Pfam Helix-loop-helix DNA-binding domain 49 105 IPR011598 GO:0046983
Adu03g02714 237 Coils Coil 27 72 - -
Adu03g02714 237 Gene3D - 52 114 IPR036638 GO:0046983
Adu03g02714 237 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 56 109 - -
Adu03g02714 237 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 46 104 IPR011598 GO:0046983
Adu03g02714 237 PANTHER TRANSCRIPTION FACTOR BHLH54 56 109 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g02714 Adu-Chr3 98473566 98483591 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g02714 56 117 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G43175 64.516 3.83e-17 75.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Adu03g02714 HLH 1.5e-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g02714 - - ahf:112747336 106.301