Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g02700 ATGGAACAGAAAAGCATTCTGCTATCTGCGATCGGTGTTGGGGTTGGAGTGGGAGTGGGACTTGGATTGGCCTCTGGACAAGGAGTTGGAATATGGGGAGCTACCACATATTCCTCAAACGCCATAACCGCTGAGAAGATAGAACAGGAAATGCTACGACAAGTTGTTGATGGAAGAGAAAGCACTGTCACTTTTGATAAATTCCCTTATTATCTCAGTGAGCAGACAAGGGTTTTGCTGACAAGTGCTGCTTATGTCCATTTAAAGCATGCCGAGGTTTCCAAGTATACTCGAAATCTTGCCCCTGCAAGCCAAACTATTCTGCTTTCAGGGCCAGCAGAACTCTATCAACAGATGCTTGCAAAGGCTTTGGCACATTACTTTGAGGCCAAGTTGCTTCTTTTAGATTTAACTGACTTTTCATTGAAGATTCAGAGTAGATATGGCTTTGGAAATCAAGAATCTTCTTTCAAAAGATCCACCTCAGAGTCGACCTTGGAACGATTATCAGACCTATTTGGCTCATTTTCAATCTTTCAACAGAGGGAGGAACCTAAAGGTACAATACAAATAAGAAGAAGAGAGGATAGGCTCATAAAAGAGAGCAAGAAGAATTGTCCTATAACTCCTCTGAAACGCACAACTAGCTGGTCTTTCGATGAAAAGCTTCTTATACAGTCTCTTTACAAGGTTCTGGTTTTTGTGTCCAAGACCTACCCTATTGTGCTATATCTGCGTGACGTTGATAAGTTGATATATAGATCGCAAAGGATATATAACTTGTTCCAAAAGATGTTGAAGAAACTATCTGGACCAATACTGATTCTTGGTTCACAAGTTCTTGATTCTAGTAATAAGTATGAACAGGTAGATGACCGGCTTAACTCACTCTTCCCGTACACCATAGAAGTCAAGCCCCCTGATGATGAATCTCATCTCGTCAGCTGGAAGTCCCAGTTGGAAGAGGATATGAAGAAGATACAAGTTCAGGATAACAAGAACCATATCATGGAAGTGCTTGCAGCCAATGACCTTGTTTGTGAAGACTTGGATTCAATCTGTGTTGCTGACACAATGGTTCTTAGTAACTACATAGAAGAGATTATTGTCTCGGCGCTTTCTTACCACTTAATGAAAAGCAAAGACCTTGAGTACAGAAATGGGAAACTTGTTATTTCTTGCAATAGTTTATCCCATGCCTTGGGTATATTCCACAAGGGAAAACTCATTGGAAGAAACACATCGAAATTGGAAGATCAAGCTGTTAAATCTGAGGTGCCAAAAGGGGAAGAAAGCGTTACAAAACCAGAAGCAAAGTCTGAAGATGCTGCTCCTGTAAAAAAGCCTGGAGCAGAAGCATCAAAGGAAGAAGGGGAAAAATCAGTTGCATCATCAAAAGCTGCTGAAGTTCCTCCGGATAACGAGTTTGAGAAGCGAATAAGACCTGAGGTGATACCAGCAGATGAGATAGATGTGAAGTTCTCTGATATTGGTGCCTTAGAAGAGACGAAAGAATCCCTCCAAGAACTGGTAATGCTTCCGCTTCGAAGGCCAGACCTCTTCACCGGAGGCCTTTTGAAGCCTTGCAGAGGAATATTGCTATTTGGACCTCCAGGCACCGGCAAGACAATGCTGGCTAAGGCCATTGCGAAGGAGGCCGGGGCAAGTTTCATCAACGTGTCCATGTCCACCATAACTTCAAAATGGTTTGGCGAAGACGAGAAGAACGTTCGTGCTTTATTCACACTTGCAGCCAAGGTGTCCCCAACCATTATATTTGTGGATGAGGTCGATAGCATGCTTGGCCAAAGGACTAGAGTTGGGGAGCACGAAGCCATGCGGAAAATCAAGAATGAATTTATGGCACATTGGGATGGCCTTATGACCAAACCGGGGGAGCGCATCCTTGTTCTTGCTGCAACCAATAGGCCATTTGACCTCGATGAAGCTATTATTAGGCGATTCGAAAGGAGAATTATGGTGGGGCTACCATCTGTGGAGAATAGGGAGAAGATTCTGAGGACTTTATTGGCGAAAGAGAAGGTGGATGATGAACTTGACTTTAAGCAACTAGCAACTATGACAGAAGGATACACTGGGAGCGATATAAAGAATCTGTGCACAACTGCTGCATATCGGCCTGTGAGAGAGCTAATTCAGCAAGAGAGGCTCAAGACTCTGGAGCAAAAGCAGAAAGCGGTTACAACAGAAGACGGGAAAGATGCAAGAGAAGAGAAGCAAGAAAGAGTGATTAGCCTTAGGGCATTGAATATGCAGGACTTGAAGGAGGCAAAGGCTCAGGTTGCTGCTAGCTTTGCGGCGGAGGGGGCTGGAATGAGCGAGTTGAAGCAGTGGAACGAGTTGTACGGAGAAGGCGGTTCAAGAAAGCAGCAGCACTTGACTTACTTTCTCTGA 2415 0.4398 MEQKSILLSAIGVGVGVGVGLGLASGQGVGIWGATTYSSNAITAEKIEQEMLRQVVDGRESTVTFDKFPYYLSEQTRVLLTSAAYVHLKHAEVSKYTRNLAPASQTILLSGPAELYQQMLAKALAHYFEAKLLLLDLTDFSLKIQSRYGFGNQESSFKRSTSESTLERLSDLFGSFSIFQQREEPKGTIQIRRREDRLIKESKKNCPITPLKRTTSWSFDEKLLIQSLYKVLVFVSKTYPIVLYLRDVDKLIYRSQRIYNLFQKMLKKLSGPILILGSQVLDSSNKYEQVDDRLNSLFPYTIEVKPPDDESHLVSWKSQLEEDMKKIQVQDNKNHIMEVLAANDLVCEDLDSICVADTMVLSNYIEEIIVSALSYHLMKSKDLEYRNGKLVISCNSLSHALGIFHKGKLIGRNTSKLEDQAVKSEVPKGEESVTKPEAKSEDAAPVKKPGAEASKEEGEKSVASSKAAEVPPDNEFEKRIRPEVIPADEIDVKFSDIGALEETKESLQELVMLPLRRPDLFTGGLLKPCRGILLFGPPGTGKTMLAKAIAKEAGASFINVSMSTITSKWFGEDEKNVRALFTLAAKVSPTIIFVDEVDSMLGQRTRVGEHEAMRKIKNEFMAHWDGLMTKPGERILVLAATNRPFDLDEAIIRRFERRIMVGLPSVENREKILRTLLAKEKVDDELDFKQLATMTEGYTGSDIKNLCTTAAYRPVRELIQQERLKTLEQKQKAVTTEDGKDAREEKQERVISLRALNMQDLKEAKAQVAASFAAEGAGMSELKQWNELYGEGGSRKQQHLTYFL 804
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g02700 804 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 1 804 - -
Adu03g02700 804 PANTHER P-LOOP NUCLEOSIDE TRIPHOSPHATE HYDROLASE SUPERFAMILY PROTEIN 1 804 - -
Adu03g02700 804 Pfam ATPase family associated with various cellular activities (AAA) 532 662 IPR003959 GO:0005524|GO:0016887
Adu03g02700 804 MobiDBLite consensus disorder prediction 420 479 - -
Adu03g02700 804 Gene3D - 491 749 IPR027417 -
Adu03g02700 804 CDD AAA 530 663 - -
Adu03g02700 804 Gene3D - 37 327 IPR027417 -
Adu03g02700 804 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 491 735 IPR027417 -
Adu03g02700 804 SMART AAA_5 528 665 IPR003593 -
Adu03g02700 804 ProSitePatterns AAA-protein family signature. 635 654 IPR003960 GO:0005524|GO:0016887
Adu03g02700 804 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 103 326 IPR027417 -
Adu03g02700 804 MobiDBLite consensus disorder prediction 420 463 - -
Adu03g02700 804 Pfam AAA+ lid domain 686 726 IPR041569 -
Adu03g02700 804 Gene3D - 664 744 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g02700 Adu-Chr3 96972189 96976384 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g02700 492 724 Calmodulin-binding Proteins AT3G56690 38.559 4.09e-43 167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g02700 - - gmx:100807464 1282.32