Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g02688 ATGGAGTTCCTACGTATTTTGTTATCTTCCATTTGTTTGTTGGTTGTGATTGATCACTGGCAAGGAAATGCTGAACCTGTCGGAGATAAGGAAGCTTTGCTTGATTTTGTGAACAAATTCCCTCCTTCTAGACCTCTGAATTGGGATGAGACCTCCTCCATGTGTGCCAATTGGACCGGAGTCACTTGCAGTGAAGATGAGTCCCGGGTCATCGCCATTCGTCTGCCGGGGGTTGGATTTCGTGGCCCAATTCCGCCGGATACTGTTAGCCGCCTCTCGGCACTGCAAACTTTGAGCCTCAGATCCAATGTCATAACTGGGCGGATACCTTCTGACTTTTCTAATTTGAAGAACTTAACTTTACTGTATCTTCAGTTCAACAATTTCTCTGGTCCTTTGCCTGATTTCTCAGTTTGGAAGAATCTTACTATTGTCAATCTGTCCAATAACCATTTCAATGGCAGCATTCCTGATTCCCTTTCCAATTTGACCGAGATTGCTGGTTTGAACCTTGCAAACAACTCGCTTTCTGGCGAAATTCCCAATCTCCAGTTGCCAAGACTGCAGCTGCTGAATCTGTCTAACAACAATTTGCATGGGAGTGTGCCTAAATCCCTCCAGAGGTTTCCTGATTCGTCATTTTTTGGAAATAATATTTCTCTTGGGAGCTCTCCTGTTGTTCCGCCAGTGCCTCCTCCGGTTTATGGGCCTTCTTCAAGATCTAAGAAGCATGGAAGGCTCAGCGAAACAGCACTGCTGGGAATTACTATTGCCTGTGGTGTTCTAGGCCTTGTGGCATTTGTTTTCTTGATCTTTGTATGCTGCTCAAGAAGGAGGGGTGAAGATGATGATGCCTTCAGTGGGAAGTTGCACAAGGGTGACATGTCTCCCGAGAAAGCTGTATCGAGGAACCAGGATGCGAATAATAAGCTGTCTTTCTTTGAGGGGTGTAATTATGCTTTTGATTTGGAGGATTTACTCAGGGCTTCTGCTGAGGTACTGGGAAAGGGAACGTTTGGTACTGCATACAAGGCAATACTGGAAGATGCAACCACGGTTGTTGTGAAGAGGTTAAAGGAGGTAGCAGTTGGAAAGAAGGATTTTGAGCAACACATGGAAATAGTAGGAAACCTTAAACATGAGAATGTGGTTGAGCTCAAGGCATATTATTATTCCAAAGATGAGAAATTAATGGTATATGATTACTATAGCCAGGGGAGTGTCTCGTCAATGTTACACG 1240 0.4452 MEFLRILLSSICLLVVIDHWQGNAEPVGDKEALLDFVNKFPPSRPLNWDETSSMCANWTGVTCSEDESRVIAIRLPGVGFRGPIPPDTVSRLSALQTLSLRSNVITGRIPSDFSNLKNLTLLYLQFNNFSGPLPDFSVWKNLTIVNLSNNHFNGSIPDSLSNLTEIAGLNLANNSLSGEIPNLQLPRLQLLNLSNNNLHGSVPKSLQRFPDSSFFGNNISLGSSPVVPPVPPPVYGPSSRSKKHGRLSETALLGITIACGVLGLVAFVFLIFVCCSRRRGEDDDAFSGKLHKGDMSPEKAVSRNQDANNKLSFFEGCNYAFDLEDLLRASAEVLGKGTFGTAYKAILEDATTVVVKRLKEVAVGKKDFEQHMEIVGNLKHENVVELKAYYYSKDEKLMVYDYYSQGSVSSMLH 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g02688 413 PANTHER PROTEIN, PUTATIVE-RELATED 23 413 - -
Adu03g02688 413 Pfam Leucine rich repeat N-terminal domain 29 64 IPR013210 -
Adu03g02688 413 Gene3D Ribonuclease Inhibitor 28 137 IPR032675 -
Adu03g02688 413 Gene3D Phosphorylase Kinase; domain 1 294 402 - -
Adu03g02688 413 ProSitePatterns Protein kinases ATP-binding region signature. 334 365 IPR017441 GO:0005524
Adu03g02688 413 PANTHER OS05G0588300 PROTEIN 23 413 - -
Adu03g02688 413 ProSiteProfiles Protein kinase domain profile. 328 413 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu03g02688 413 SUPERFAMILY L domain-like 39 209 - -
Adu03g02688 413 Pfam Protein kinase domain 331 412 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu03g02688 413 SUPERFAMILY Protein kinase-like (PK-like) 332 413 IPR011009 -
Adu03g02688 413 Pfam Leucine Rich Repeat 187 208 IPR001611 GO:0005515
Adu03g02688 413 Pfam Leucine Rich Repeat 141 163 IPR001611 GO:0005515
Adu03g02688 413 Gene3D Ribonuclease Inhibitor 138 226 IPR032675 -
Adu03g02688 413 Pfam Leucine rich repeat 84 129 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g02688 Adu-Chr3 96458266 96459505 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g02688 1 413 Receptor kinase-like Gene Family AT4G23740 60.993 4.22e-161 466
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Adu03g02688 Pkinase 7.4e-11 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g02688 - - adu:107479781 785.793