Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g02680 ATGCTAAATAAGAATAAGTCTTGCAGGCTTCGATGGTACAACCAGCTCTCCCTATCCGTGGAGTATCGGGCCTTCACCCCTGAAGAGGATGACACCATAATCAGAGCTCACGCTCGGTTCGGCAACAAGTGGGCCACCATAGTCCGACTCTTTTTTGGCAAAACCGACAATGCCATTAAAAACTACTGGAACTCTACCCTTAAACACAAGTGCGCCTCCATGGGCCCCATCGACGATCCTCACTTTGCGCAGCCACTCAAACGCTCCGTCAGCACCAGCGCTGTCGTACCCGTGTCAACGGTGGTGGTGAGGTACTCGTTGCCGACGGTGATGGCGACGACGGAGGTGGCGGGCCGTGGCTCAACTCATCCATGCCCTTCACCACTTTGA 390 0.5462 MLNKNKSCRLRWYNQLSLSVEYRAFTPEEDDTIIRAHARFGNKWATIVRLFFGKTDNAIKNYWNSTLKHKCASMGPIDDPHFAQPLKRSVSTSAVVPVSTVVVRYSLPTVMATTEVAGRGSTHPCPSPL 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g02680 129 PANTHER TRANSCRIPTION FACTOR MYB73 5 95 - -
Adu03g02680 129 ProSiteProfiles Myb-like domain profile. 17 67 IPR001005 -
Adu03g02680 129 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 23 71 IPR017930 -
Adu03g02680 129 Pfam Myb-like DNA-binding domain 24 66 IPR001005 -
Adu03g02680 129 PANTHER MYB PROTEIN-RELATED 5 95 - -
Adu03g02680 129 SUPERFAMILY Homeodomain-like 5 72 IPR009057 -
Adu03g02680 129 CDD SANT 24 67 IPR001005 -
Adu03g02680 129 SMART sant 21 69 IPR001005 -
Adu03g02680 129 Gene3D - 23 88 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g02680 Adu-Chr3 95929085 95930957 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g02680 5 96 MYB Transcription Factor Family AT4G37260 60.784 3.09e-35 122
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Adu03g02680 Myb_DNA-binding 6.4e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g02680 K09422 - aip:107641435 213.001