Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g02674 ATGGCTGACACTGCTGCAGAAGTTCCCACAAGGAGGTCAAGGAGCAAAAGGGCTCTCAAGGACAAAAACTCGTCAACAAATGAGTCCGCAAACACCATCACCACCAAGGTCTCAGAATTCACACCTCCAATTTCTGAACAAGTGATAGTGAAGGAGAACCTCGACACAACCACCACCGTTTCTCAACCCAAGAAAGGAAGAGCTGCTTCAAAGAAACAAAGCACGAAGCAGCAGCAGCAGCAATCTCCTTCTTCTTTTGAGAAAGAGTTGCTTGAGATGCAGGAGAAGCTGCAGCAGCTGCACCTCGAGAAGGAGAAAACCGAGGAGCTCTTAAAAGCCAAGGATGAGGCCCTCAAGCTCAAGGACCAAGAGCTTGAAAACCGAGGCAAGGAACAGGAGAAGCTCCAGACCGAGCTCAAGAAGCTCCAGAAGTTGAAGGAGTTCAAACCCATTCACTCCATGTTCTTGTTTTTCTTTCTTTTTTCACTAACGGTGTTCATAAAATTTCAGAACTTGCCTCTTCCGAAAGATAAGGAACAAGACAAGAAGGACAAGAAGAAAAGGCCCTCTGCTCCTTACATTCTGTGGTGCAAGGATCAATGGAATGAGATCAAGAAAACAAACTCAGAGGCAGAATTCAAGGACATCTCAAACATGTTGGGGGCTAAATGGAAGACAGTTAGCGCTGAAGAGAAGAAGCCGTACGAAGAGAAGTACAATGCTGAAAAAGAAGCATATATGGAGGTAATGGCGAAGGAAAAGCGCGAGACGGAGGCACTGAAGCTGTTGGAAGAGGATCAGAAGCAGAAGATGGCGATGGAGCTTCTTGAACAATACATGCAGTTCAGACAAGAAACAGAGAAAGAGACTACAAAGAAGAACAAGAAAGAGAAGGATCCATTGAAGCCAAAGCACCCAATGTCAGCATATATCCTTTTCACAAACGATAGGCGTGCGGCTCTTGTTGCAGAGAACAAGAGCGTTGTGGAAGTTGCCAAGATCACAGGGGAAGAGTGGAAGAACATGACGGAGGAACAGAAGAGGCCTTACGAGGAGATGGCGAAGAAGAAGAAGGAGCAGTATGTTCAAGAAATGGAAGCTTATAAGCAGAGGAAACATGAAGAGGCTGCAAATCTCATGAAGGAAGAGGAGGAGCACATGAAGCTTCAGAAGCAGGAAGCGTTGCAGCTCCTCAAGAAGAAAGAGAAAACTGAAATCCTCATCAAGAAAACAAAGCAGAAGAAGAAGCAGAACAAGGAAGATAAGAATTCTGACCCAAACAGGCCTAAGAGGCCTCCATCCTCATTCCTCTTATTCAGCAAGGAAGCAAGGAAAGCTTTACAGGAGGAACGTCCAGGAATCAACATTTCCACCCTTAATGCACTCATTTCATTGAAGTGGAAGGAACTGAGCGAGGAAGATAGACAAATGTGGAATGGGAAAGCAAGTGAAGCAATGGAAGTGTACAAGAAGGAATTGGAGGAATACAACAAAACCATTGCTTCAACTGAAGAATGA 1518 0.4513 MADTAAEVPTRRSRSKRALKDKNSSTNESANTITTKVSEFTPPISEQVIVKENLDTTTTVSQPKKGRAASKKQSTKQQQQQSPSSFEKELLEMQEKLQQLHLEKEKTEELLKAKDEALKLKDQELENRGKEQEKLQTELKKLQKLKEFKPIHSMFLFFFLFSLTVFIKFQNLPLPKDKEQDKKDKKKRPSAPYILWCKDQWNEIKKTNSEAEFKDISNMLGAKWKTVSAEEKKPYEEKYNAEKEAYMEVMAKEKRETEALKLLEEDQKQKMAMELLEQYMQFRQETEKETTKKNKKEKDPLKPKHPMSAYILFTNDRRAALVAENKSVVEVAKITGEEWKNMTEEQKRPYEEMAKKKKEQYVQEMEAYKQRKHEEAANLMKEEEEHMKLQKQEALQLLKKKEKTEILIKKTKQKKKQNKEDKNSDPNRPKRPPSSFLLFSKEARKALQEERPGINISTLNALISLKWKELSEEDRQMWNGKASEAMEVYKKELEEYNKTIASTEE 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g02674 505 Coils Coil 90 145 - -
Adu03g02674 505 Gene3D High mobility group box domain 286 382 IPR036910 -
Adu03g02674 505 Gene3D High mobility group box domain 410 505 IPR036910 -
Adu03g02674 505 Gene3D High mobility group box domain 173 256 IPR036910 -
Adu03g02674 505 SUPERFAMILY HMG-box 291 375 IPR036910 -
Adu03g02674 505 MobiDBLite consensus disorder prediction 284 304 - -
Adu03g02674 505 ProSiteProfiles HMG boxes A and B DNA-binding domains profile. 186 254 IPR009071 -
Adu03g02674 505 Pfam HMG (high mobility group) box 303 369 IPR009071 -
Adu03g02674 505 Pfam HMG (high mobility group) box 429 497 IPR009071 -
Adu03g02674 505 Pfam HMG (high mobility group) box 187 251 IPR009071 -
Adu03g02674 505 Coils Coil 351 421 - -
Adu03g02674 505 Coils Coil 479 505 - -
Adu03g02674 505 Coils Coil 236 256 - -
Adu03g02674 505 MobiDBLite consensus disorder prediction 406 443 - -
Adu03g02674 505 CDD HMGB-UBF_HMG-box 303 366 - -
Adu03g02674 505 SUPERFAMILY HMG-box 424 500 IPR036910 -
Adu03g02674 505 MobiDBLite consensus disorder prediction 24 42 - -
Adu03g02674 505 MobiDBLite consensus disorder prediction 1 86 - -
Adu03g02674 505 PANTHER HIGH MOBILITY GROUP B PROTEIN 13 7 504 - -
Adu03g02674 505 SMART hmgende2 428 498 IPR009071 -
Adu03g02674 505 SMART hmgende2 302 370 IPR009071 -
Adu03g02674 505 SMART hmgende2 185 255 IPR009071 -
Adu03g02674 505 MobiDBLite consensus disorder prediction 284 305 - -
Adu03g02674 505 CDD HMGB-UBF_HMG-box 188 251 - -
Adu03g02674 505 SUPERFAMILY HMG-box 175 251 IPR036910 -
Adu03g02674 505 PANTHER HIGH MOBILITY GROUP B PROTEIN 13 7 504 IPR044601 GO:0003677
Adu03g02674 505 MobiDBLite consensus disorder prediction 9 23 - -
Adu03g02674 505 CDD HMGB-UBF_HMG-box 429 494 - -
Adu03g02674 505 ProSiteProfiles HMG boxes A and B DNA-binding domains profile. 303 369 IPR009071 -
Adu03g02674 505 ProSiteProfiles HMG boxes A and B DNA-binding domains profile. 429 497 IPR009071 -
Adu03g02674 505 MobiDBLite consensus disorder prediction 50 86 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR HMG Adu03g02674 HMG_box 1.8e-16 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g02674 K09273 - gmx:100783033 485.337
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu03g02674 03 95465393 95467362 Adu03g02674 03 95465393 95467362 ECH