Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g02670 ATGGCCAAATGGGTAGATCAAGTGAGAGTGAGCTTTGAGAGTGGCCTTGAAGGACCACATGAAGATGGTTACAACTGGAGAAAATATGGACAGAAAGATATCCTTGGTGCCAAATATCCCAGAAGTTATTATAGGTGCACCTTCCGGAACACTCAGGGGTGCTGGGCCACGAAGCAAGTACAGAGATCAGACGAAGATCCTACCATATTTGACATAACTTACAAAGGAAGGCATACCTGTTCTCAGGGAAACAAGGCTGTTCCGCAACCGAAATCGCCAGACAAACATGAGCAACTGCAATGTCATAGTAACGAAATTCAGCATAGACAAACATCAGAAGAAAGCCTGACAACTTTCGGGACCATTATGACAGTTAAAAGAGATATGGTGGCAAATGGAGAGATGGAATATCCTTTCACTTTCCCTTCAACTTCATTTGGAAGCATGGCACAAGAAAGCTACAGCTTGATTCCTTCAGCCCTGGAGAACGAATCCTTCTTGAGCAGTCATTTCCAAACTCACTTATTATATCCAAACATGCAAGAATTTAAATACCTGCCATCTACGTCTTTCCAGATGAATGAGCTTGATGGGATCTATAATAGGCCACTTTCAGAATCAGATATTACTGAGATCATTTCCACCAACACATCCACCACCAATTCTCCAGTTCCGGAGTTCAATTTCTCACTTGATCCAGTGGAAATTGATCCAAATTTCCCTCCCAATACCCTGGATTTTTCTCCTAGAGCCCTTAACAACAAGAACATCTAG 774 0.4251 MAKWVDQVRVSFESGLEGPHEDGYNWRKYGQKDILGAKYPRSYYRCTFRNTQGCWATKQVQRSDEDPTIFDITYKGRHTCSQGNKAVPQPKSPDKHEQLQCHSNEIQHRQTSEESLTTFGTIMTVKRDMVANGEMEYPFTFPSTSFGSMAQESYSLIPSALENESFLSSHFQTHLLYPNMQEFKYLPSTSFQMNELDGIYNRPLSESDITEIISTNTSTTNSPVPEFNFSLDPVEIDPNFPPNTLDFSPRALNNKNI 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g02670 257 SUPERFAMILY WRKY DNA-binding domain 19 82 IPR036576 GO:0003700|GO:0006355|GO:0043565
Adu03g02670 257 Pfam WRKY DNA -binding domain 21 80 IPR003657 GO:0003700|GO:0006355|GO:0043565
Adu03g02670 257 SMART WRKY_cls 20 82 IPR003657 GO:0003700|GO:0006355|GO:0043565
Adu03g02670 257 Gene3D WRKY domain 6 83 IPR036576 GO:0003700|GO:0006355|GO:0043565
Adu03g02670 257 PANTHER WRKY TRANSCRIPTION FACTOR 41-RELATED 1 244 - -
Adu03g02670 257 ProSiteProfiles WRKY domain profile. 15 78 IPR003657 GO:0003700|GO:0006355|GO:0043565
Adu03g02670 257 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 1 244 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g02670 Adu-Chr3 95364349 95366202 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g02670 1 241 WRKY Transcription Factor Family AT4G11070 40.574 5.15e-51 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Adu03g02670 WRKY 4.9e-27 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g02670 - - adu:107480050 516.924
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu05g01118 05 15200352 15201608 Adu03g02670 03 95364349 95366202 PCT