Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g02644 ATGGCTACCGTGCCGCCATGTATATTATTCCTCTTCTTGGTGGCGCTAACAAGCATAGGCATAGCAAAGGCTCAGTTCTACTGTGAAAGCATATCATGCGGGAACGGAGGAGTTTCAATTGAGTTCCCGTTTTACCTGAAAGAAAGTCAAATCCCTGGATGTGGCTACCCAGGGTTCGAGCTCTCATGCGCCAACACCACCACGGAGCCCTTGCTGACTCTCCCAGCTGAACCAGGGTTTAATAGTAGTAGCAAATCTTCGGTGGTGGCGATCTTGTCGAATCCGCCGTTTCCAACGCCGTGGACGTCGCTGTGCCACGTCATATCGTGGGCTATGATCCCGGTTGCCGGTTTTCCGTGGCTGTTTTGGACGGATTACTATTCTGACATAAAGTTGGAATGGGATAACCCAAATTGCGGAAGTTGCGAGGCACGTGGAGGACGGTGTGGGTTCGTTGGGCCAACGCTTCGGGACACTGCTTTTCATGTTGGTTGTTACGATCTTCCCACTCAACTTCAAGGTCTTTCGAGGAAAACCAAGTACGGTTTAGGTATGGGCTTAGGAATACCTGGAGCCTTGTGTATTATTGCGCTTGCATATTTGTTCTACGCCAAGATGAAGACACATGAGCAACAGAGGCTATCAAGAAGTGATTTTTCGACCATAATTTTACCGCGTCTTCCTGCTCAAATCATGGGATTGGATGCTGCTAGCATAGAAAAATACCCCAAAACCCTTCTTGGTGAAAGTGGGCGATTGCCTAAGCCTAATGACAATCTTTGTTCCATATGTCTCTGTGAATACCAGCCCAAGGAGACCTTGAGGACCATACCTGAATGCAATCATTATTTTCATGCCAATTGTATAGATGGATGGCTGAAGATGAATGCTACTTGTCCTCTGTGTCGCAATTTACCTGAAAGATCTGTTGCATCATTAACCCCGTCTATACCTGCATCTCCCACTTATTAG 972 0.4733 MATVPPCILFLFLVALTSIGIAKAQFYCESISCGNGGVSIEFPFYLKESQIPGCGYPGFELSCANTTTEPLLTLPAEPGFNSSSKSSVVAILSNPPFPTPWTSLCHVISWAMIPVAGFPWLFWTDYYSDIKLEWDNPNCGSCEARGGRCGFVGPTLRDTAFHVGCYDLPTQLQGLSRKTKYGLGMGLGIPGALCIIALAYLFYAKMKTHEQQRLSRSDFSTIILPRLPAQIMGLDAASIEKYPKTLLGESGRLPKPNDNLCSICLCEYQPKETLRTIPECNHYFHANCIDGWLKMNATCPLCRNLPERSVASLTPSIPASPTY 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g02644 323 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 82 320 - -
Adu03g02644 323 SUPERFAMILY RING/U-box 256 305 - -
Adu03g02644 323 Pfam Ring finger domain 260 303 IPR001841 -
Adu03g02644 323 CDD RING-H2_PA-TM-RING 261 303 - -
Adu03g02644 323 Pfam Wall-associated receptor kinase galacturonan-binding 28 75 IPR025287 GO:0030247
Adu03g02644 323 PANTHER RING-H2 FINGER PROTEIN ATL20-LIKE 10 80 - -
Adu03g02644 323 PANTHER RING-H2 FINGER PROTEIN ATL20-LIKE 82 320 - -
Adu03g02644 323 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 228 307 IPR013083 -
Adu03g02644 323 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 10 80 - -
Adu03g02644 323 ProSiteProfiles Zinc finger RING-type profile. 261 303 IPR001841 -
Adu03g02644 323 SMART ring_2 261 302 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g02644 Adu-Chr3 93716673 93718305 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g02644 61 304 C3H Transcription Factor Family AT1G28040 33.721 5.10e-37 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g02644 - - adu:107479734 522.316