Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g02616 ATGGATGAGATGACAGAGTCGAAGATTCGGAAGCAGGCTTCCACCCATCTCGGCCTCGACCTCTCCCAGCCGCCCCTCAAAGCCTTCGTCAAGCAGGTCGTTCAAGCATTCCTCGACGAGAAGCAGCGCCAACCTGAACCTGAAGCAGATCACAACAAGCCGGAGTACGATGACGACGGCGATCTCATCATCTGCAAGCTCTCTGAGAGGAGAAGGGTCACCGTTCAGGACTTCCGAGGCAAAACTTTGGTCTCCATTCGCGAGTATTATCGAAAGGACGGCAAGGAACTCCCTACCTCTAAAGGAATAAGTTTGACAGAGGAGCAATGGTCAGCCTTCAAGAAAAATGTGCCTGCTATAGAAAAGGCCATTAAGAAAATGCAGTCCGGCAACATATAA 399 0.5088 MDEMTESKIRKQASTHLGLDLSQPPLKAFVKQVVQAFLDEKQRQPEPEADHNKPEYDDDGDLIICKLSERRRVTVQDFRGKTLVSIREYYRKDGKELPTSKGISLTEEQWSAFKKNVPAIEKAIKKMQSGNI 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g02616 132 Gene3D Transcriptional Coactivator Pc4; Chain A 54 130 IPR009044 GO:0003677|GO:0006355
Adu03g02616 132 PANTHER RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR KELP 1 129 - -
Adu03g02616 132 PANTHER RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR 1 129 IPR045125 GO:0003713|GO:0060261
Adu03g02616 132 MobiDBLite consensus disorder prediction 41 60 - -
Adu03g02616 132 SUPERFAMILY ssDNA-binding transcriptional regulator domain 64 127 IPR009044 GO:0003677|GO:0006355
Adu03g02616 132 PIRSF RNA_polymII_KELP 1 131 IPR017415 -
Adu03g02616 132 Pfam DEK C terminal domain 1 38 IPR014876 -
Adu03g02616 132 Pfam Transcriptional Coactivator p15 (PC4) 65 116 IPR003173 GO:0003677|GO:0006355
Adu03g02616 132 MobiDBLite consensus disorder prediction 39 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g02616 Adu-Chr3 90663759 90665568 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Coactivator p15 Adu03g02616 PC4 5.4e-24 CL0609
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g02616 K25815 - gmx:100499671 205.297
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu03g02616 03 90663759 90665568 Adu03g02616 03 90663759 90665568 ECH