Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g02609 ATGACACCTGAAGAGGCTCTGAGTGAAATACTTCAGGCCTGTAAATTAAAATTAGGAGATCTTAAAGGAGCATTATTCGATGCTGAGTTTGCACTGCATGAAGAGGACAACAATGTCAAAGCATTTTTCCGGCAAGGACAGGCACATATGGCACTCCATGACATAGATGCTGCAGTTGAAAGCTTTAAAAATGCACTGGTCTTAGAGCCAAATGATGGGGGAAGAGGGGTAATGGGAATATGGGTATTGAAGTACCTGCAACATATGTGTGAAAATCAGTCCTGCCGGAGATTCTTCCCATCAGGTTCTGCCTTTGAGATATGGTCTGAGTTTAAATCTTTATTGCAAAACCCATGGCATAATTCATCCTTTGAGGGATCTGGATTTGCAAGACTATTCCTTCCTATGAACGTGGACAATCAGGATTTTATTCACACCGGCTTGATAGAAATTCCCTCAGAGGAGAAGTTTCTACAAATCTTTGTAAGAGATTAG 495 0.4121 MTPEEALSEILQACKLKLGDLKGALFDAEFALHEEDNNVKAFFRQGQAHMALHDIDAAVESFKNALVLEPNDGGRGVMGIWVLKYLQHMCENQSCRRFFPSGSAFEIWSEFKSLLQNPWHNSSFEGSGFARLFLPMNVDNQDFIHTGLIEIPSEEKFLQIFVRD 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g02609 164 Gene3D Tetratricopeptide repeat domain 4 92 IPR011990 GO:0005515
Adu03g02609 164 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 12 74 - -
Adu03g02609 164 SMART tpr_5 39 72 IPR019734 GO:0005515
Adu03g02609 164 ProSiteProfiles TPR repeat profile. 39 72 IPR019734 GO:0005515
Adu03g02609 164 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP40 12 74 - -
Adu03g02609 164 Pfam Tetratricopeptide repeat 40 72 IPR013105 -
Adu03g02609 164 SUPERFAMILY TPR-like 13 72 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g02609 Adu-Chr3 89999281 90003052 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g02609 13 72 Calmodulin-binding Proteins AT3G25230 46.667 2.05e-08 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g02609 K05864 K06699 gmx:100814812 109.383