Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g02603 ATGCAGTTGCCAGAGAGACCCGTGACAGTTAGTTTGTTCTGTTCTGCATTGCTTCCTCATGTTAATGTTCACACCATTCAATTTTACGGAGCTGTTTTTTTTTGGTTGGGTGTGCAGACACCGTGTGGTTACAAGTTTTGTTTGAAGTGCTTCCAGAAGTGGATTGGGCAGGCAAAGCGGACCTGTTCGAACTGTCGCAGTCAGACCCCACCTAAGATGGCCGAAAACCCTAGGATTAACGACCATCTGACCATTATTATCCATTTGGCGAGGCAGATGAAGGCCACGTGGATGGTGAGTGCGGTGGCGCAGCCCAAGGTGTATGTTTCTCGAGAAAACGATGACCTTCCAGATACTTTACCACTGAGCGGGCGAAGAAGACTGGCAAGGCCAACGAACAATCGTAGTGTTCTTGTTGGGGATACTTGGGAGGATAGAACGGATTGCAGGCATTGGGGTGCCCATTTCCCTCATGTTGCGGGCATTACTGGCAAAAATGGTTTTAGTTCTCAATCTGTAGCACTTTCAGGTGGCTATGTTGATGACGAGGATCATGTAGAGTGGTTCCTCTACACTGGAAGGGACAATGTTGCTGTGCTGGGTCTCCAACCTTTGGTGTTAAACAAGGCCCTCAGTTTGGAAAGCATTCATACTCTTGCTAAAGGTTCTCCCTCTTCAAAGTGGGGATCTGTTAGAGCTTCTATGGGACATCGTGAACCATTCGATTTCAGATTTGTTGCTGTTGGAAATGAAAATTGTTTTCCTCATCCGAAGTGCACTATCAAGAAAAGTACTTTAAGTTCTATGACTGAGTATTTGACAAGACATCAAGATCGGGTCCAAAGTGAATATGCTGTTACGAATGATGATGCAAGAAATGAAACCCTTTTGGCTGCATTGGCTGAAGCTGCATTCCTCATTGGATTAGAAAGGAATAGTGACAGGAGGATGCCTTTTAGGCTATGCAACtga 972 0.4558 MQLPERPVTVSLFCSALLPHVNVHTIQFYGAVFFWLGVQTPCGYKFCLKCFQKWIGQAKRTCSNCRSQTPPKMAENPRINDHLTIIIHLARQMKATWMVSAVAQPKVYVSRENDDLPDTLPLSGRRRLARPTNNRSVLVGDTWEDRTDCRHWGAHFPHVAGITGKNGFSSQSVALSGGYVDDEDHVEWFLYTGRDNVAVLGLQPLVLNKALSLESIHTLAKGSPSSKWGSVRASMGHREPFDFRFVAVGNENCFPHPKCTIKKSTLSSMTEYLTRHQDRVQSEYAVTNDDARNETLLAALAEAAFLIGLERNSDRRMPFRLCN 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g02603 323 Gene3D - 133 210 IPR036987 -
Adu03g02603 323 Gene3D Glycosidases 212 280 - -
Adu03g02603 323 ProSiteProfiles YDG domain profile. 132 275 IPR003105 -
Adu03g02603 323 PANTHER E3 UBIQUITIN-PROTEIN LIGASE UHRF-RELATED 38 119 IPR045134 -
Adu03g02603 323 Pfam SAD/SRA domain 136 195 IPR003105 -
Adu03g02603 323 SMART G9a_1 127 251 IPR003105 -
Adu03g02603 323 PANTHER FINGER PROTEIN, PUTATIVE-RELATED 131 194 - -
Adu03g02603 323 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 32 106 IPR013083 -
Adu03g02603 323 PANTHER E3 UBIQUITIN-PROTEIN LIGASE UHRF-RELATED 131 194 IPR045134 -
Adu03g02603 323 SUPERFAMILY RING/U-box 38 73 - -
Adu03g02603 323 SUPERFAMILY PUA domain-like 134 202 IPR015947 -
Adu03g02603 323 SUPERFAMILY (Trans)glycosidases 182 258 IPR017853 -
Adu03g02603 323 PANTHER FINGER PROTEIN, PUTATIVE-RELATED 38 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g02603 Adu-Chr3 88809037 88820278 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g02603 1 193 C2H2 Transcription Factor Family AT5G39550 41.364 2.41e-43 155
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g02603 K10638 - gmx:100781044 191.045