Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g02601 ATGAAAGGAATATCCTATCGGGGTAATCATATTTGCTTCGGAAGATATGCTCTTCAGGCACTTGAACCCGCTTGGATCACATCTAGACAAATAGAAGCAGGTCGGCGGGCAATGTCACGAAATGTCCGCCGAGGTGGACAAATATGGGTACGGATATTTCCAGACAAACCAGTTACAGTAAGACCAACCGAAACGCGTATGGGTTCGGGAAAGGGATCTCCCGAATATTGGGTAGCTGTCGTTAAACCCGCCGATAACAGCGGAGCCCGCCAATTGATGTGTATTCGAATCATAGGAGCAGGTAATCGACGATATGCTTCTATTGGTGACATTGTTGTTGCTGTAATCAAGGAAGCGGTACCAAATATGTCTTTAGAAAGATCAGAAGTGATTAGAGCTGTAATTGTACGTACTTGTAAAGAACTTAAACGTAGCAATGGCATGATAATACAATATGATGATAATGCCGCGGTTGTCATTGATCAAGAGGGAAATCCAAAAGGAACTCGAATTTTTGGCGCAATCGCCCGGGAATTGAGACAGTTAAATTTCACTAAAATAGTTTCATTAGCACCTGAGACTCAAGGTCGTCACCCTCTGTTTTCGTCGCTGCTCTATCGCGCTCTGTCACAAATGAATCGATGGAATTTGACCCGATCCCAATCGGTTCCTGCTCCAAAGAGAACCACAGCATCTACCAGTAGTTGTTTAAATTACGCCGATTCAGCAAAGCATTGCCATATGGAGTTACTCATGCAGCAAAGTGTAACATATTTCTGCAGCAGTATCACTAATCAGCTCTACAAAATTGAAGCTAGGAAGCTCAGCTCCTCCTCCAAGAAAGGCCGGTGGCCAGAGATGAGTGTAACAGAAGGAACAAAGCCGAAGTGGCTGCACTAG 900 0.4456 MKGISYRGNHICFGRYALQALEPAWITSRQIEAGRRAMSRNVRRGGQIWVRIFPDKPVTVRPTETRMGSGKGSPEYWVAVVKPADNSGARQLMCIRIIGAGNRRYASIGDIVVAVIKEAVPNMSLERSEVIRAVIVRTCKELKRSNGMIIQYDDNAAVVIDQEGNPKGTRIFGAIARELRQLNFTKIVSLAPETQGRHPLFSSLLYRALSQMNRWNLTRSQSVPAPKRTTASTSSCLNYADSAKHCHMELLMQQSVTYFCSSITNQLYKIEARKLSSSSKKGRWPEMSVTEGTKPKWLH 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g02601 299 ProSitePatterns Ribosomal protein L16 signature 2. 66 77 IPR020798 GO:0003735|GO:0005840|GO:0006412
Adu03g02601 299 Gene3D Ribosomal protein L10e/L16 1 81 IPR036920 GO:0003735|GO:0005840|GO:0006412
Adu03g02601 299 TIGRFAM rplN_bact: ribosomal protein uL14 81 193 IPR005745 GO:0003735|GO:0006412|GO:0015934
Adu03g02601 299 Pfam Ribosomal protein L14p/L23e 80 193 IPR000218 GO:0003735|GO:0005840|GO:0006412
Adu03g02601 299 ProSitePatterns Ribosomal protein L14 signature. 133 159 IPR019972 -
Adu03g02601 299 Gene3D Ribosomal protein L14 82 194 IPR036853 GO:0003735|GO:0005840|GO:0006412
Adu03g02601 299 TIGRFAM rplP_bact: ribosomal protein uL16 1 83 IPR000114 GO:0003735|GO:0006412|GO:0019843
Adu03g02601 299 ProSitePatterns Ribosomal protein L16 signature 1. 43 54 IPR020798 GO:0003735|GO:0005840|GO:0006412
Adu03g02601 299 Hamap 50S ribosomal protein L14 [rplN]. 60 195 IPR000218 GO:0003735|GO:0005840|GO:0006412
Adu03g02601 299 Pfam Ribosomal protein L16p/L10e 2 83 IPR016180 GO:0003735|GO:0005840|GO:0006412
Adu03g02601 299 SUPERFAMILY Ribosomal protein L14 78 193 IPR036853 GO:0003735|GO:0005840|GO:0006412
Adu03g02601 299 PANTHER RIBOSOMAL PROTEIN L14B/L23E-RELATED 82 194 - -
Adu03g02601 299 PANTHER 50S/60S RIBOSOMAL PROTEIN L14/L23 82 194 IPR000218 GO:0003735|GO:0005840|GO:0006412
Adu03g02601 299 PRINTS Ribosomal protein L16 signature 42 71 IPR000114 GO:0003735|GO:0006412|GO:0019843
Adu03g02601 299 PRINTS Ribosomal protein L16 signature 72 101 IPR000114 GO:0003735|GO:0006412|GO:0019843
Adu03g02601 299 PRINTS Ribosomal protein L16 signature 8 20 IPR000114 GO:0003735|GO:0006412|GO:0019843
Adu03g02601 299 PRINTS Ribosomal protein L16 signature 26 37 IPR000114 GO:0003735|GO:0006412|GO:0019843
Adu03g02601 299 SMART Ribosomal_L14_2 79 195 IPR000218 GO:0003735|GO:0005840|GO:0006412
Adu03g02601 299 CDD Ribosomal_L16_L10e 7 83 IPR016180 GO:0003735|GO:0005840|GO:0006412
Adu03g02601 299 SUPERFAMILY Ribosomal protein L16p/L10e 1 83 IPR036920 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g02601 Adu-Chr3 88497397 88500790 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g02601 79 182 Cytoplasmic Ribosomal Protein Gene Family AT1G04480 37.037 6.61e-15 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g02601 K02874 - dct:114579343 307.375