Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g02576 atggtgaagtgggtgaaggaagaaagggagcattccgacccatggcatccgacggagCTTGGCCACAAGTCCGACGGCCAAACCATCGTGTGGCTCCTCTGCCAGGCCGAGCCCTCAATCATCGCTGCCACCGAAACCGGAACCACTCCCGCCAGCTTCTCCTCCGTTTTCGTCTCTGTACGCGGCGGTGCTGGCTCTCTCTCTTCTCCTTCCTCAACCTCCGCATCATCTTCGCTCGACCACAAGCCCTTGCTCCCTCTCACTCCCTTCATACTCGGCAAGTGCATATGCACTGACAACGACGCTTCCGCCAAGGACGATGACGTTATTTATGGCCACTTGTTTGTTGTCTCTGAGCTCGAAAGAATGAAGCTAAAGGTCTATGACACGGAAACAGACTCCTGGGATGCCATAGATGGCCCCCCTTTGCCTGAGCAAATATGCAAGCCTTTTGCTGTCAATGCTTGCGATTGCCATATTTATGTCGTGGGCTGA 495 0.4808 MVKWVKEEREHSDPWHPTELGHKSDGQTIVWLLCQAEPSIIAATETGTTPASFSSVFVSVRGGAGSLSSPSSTSASSSLDHKPLLPLTPFILGKCICTDNDASAKDDDVIYGHLFVVSELERMKLKVYDTETDSWDAIDGPPLPEQICKPFAVNACDCHIYVVG 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g02576 164 Pfam TCP family transcription factor 19 75 IPR017887 -
Adu03g02576 164 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 19 114 IPR005333 GO:0003700
Adu03g02576 164 PANTHER TRANSCRIPTION FACTOR TCP FAMILY-RELATED 19 114 - -
Adu03g02576 164 MobiDBLite consensus disorder prediction 1 20 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g02576 Adu-Chr3 86335463 86339624 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g02576 19 103 TCP Transcription Factor Family AT5G23280 60.227 1.31e-24 94.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Adu03g02576 TCP 7.3e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g02576 - K16221 aip:110269354 164.851