Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g02560 ATGGACAAAGAGCTCAGGTCTCATCTGAATTCGGACTGCTTTTGTAGTGGGAGCATGGCTGTCACTATAGTGAAGCAGGGAGTCTCGAAGAGTGGTTGGCACAAGGAAGATGAAATCCTTGATGACAGTTGGGTTCAGCAAAGTAGAAAGAAAGGGCCAGCTACCTCGCATCTCAATGGATTGAATTGGGAGGTGCTTGTTGTTAATGAGTTGGATGTCAATGCCTTTTGGCTACCTGGTGGTAAGATTGTTGTATACACCGGATTGTTAGAGCATTTTAAAAGTGATGCTGAGATTGCCACTATTATTAGACATGAGGTTGGTCATGCTTTGGCCCGACACACCGCTGAATATATGACAAAGAACTTGTGGTTTGCTATCCTGTAG 387 0.4444 MDKELRSHLNSDCFCSGSMAVTIVKQGVSKSGWHKEDEILDDSWVQQSRKKGPATSHLNGLNWEVLVVNELDVNAFWLPGGKIVVYTGLLEHFKSDAEIATIIRHEVGHALARHTAEYMTKNLWFAIL 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g02560 128 PANTHER METALLOENDOPEPTIDASE OMA1 48 128 - -
Adu03g02560 128 Gene3D Metalloproteases ("zincins"), catalytic domain 36 120 - -
Adu03g02560 128 Pfam Peptidase family M48 44 121 IPR001915 GO:0004222|GO:0006508
Adu03g02560 128 PANTHER METALLOENDOPEPTIDASE OMA1, MITOCHONDRIAL 48 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g02560 Adu-Chr3 84333384 84334067 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g02560 1 27 PP2C-type Phosphatase Gene Family AT1G03590 77.778 2.26e-08 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g02560 K23010 - adu:107495268 192.971