Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g02529 ATGGGAAGGAAGTGCTCACATTGTGGGAACGTAGGGCACAATTCAAGAACATGCACTTCTTCTTCGTTTCTTGGAATCCGTCTATTTGGAACCCACCTTCTAGCAGATCCCTCCTCCTCCTCCTCCTCCCCCGCGACGATGATGACGATGAACAACAAGTACTTTAGCATGGACTCGTTAACATTATTCCccactactactactactactactactactgctgctattggttatctaTCAGATGGAGCTCCACCTCAAGACAAGAAGAAAGGGGTAGCATGGACGGAAGAGGAGCACAGAAGATTCCTGGTTGGGCTTGAGAAGCTGGGGAAGGGAGACTGGAGGGGCATTTCTAGAAACTTCGTAACCACCAGAACACCGACTCAAGTTGCCAGCCATGCTCAGAAGTATTTCCTCCGTCTTGCTAATACCGTAAACCACAACAAACGCCGTTCAAGTCTCTTTGACACAAACAATACTCCTCCTACTACTGCTGCTGCTGCTGCTGCTACATTGTCATTTCACTTTCTTGAACAACAACAAACCATCAACAACAGCAATAAGCCGTTGTTATCAACAGAAACTACTTCTGAATCCTCCTCCTCCTCTTCCTCCTCCTCCTCTATGTATAATAATAGTGTGCCACCACCGGATCTGGACCTCACTCTTGCACCGCCGCCACCACCTAACTCCTCCTCATGCTTCCCCCAATTATAA 717 0.4491 MGRKCSHCGNVGHNSRTCTSSSFLGIRLFGTHLLADPSSSSSSPATMMTMNNKYFSMDSLTLFPTTTTTTTTTAAIGYLSDGAPPQDKKKGVAWTEEEHRRFLVGLEKLGKGDWRGISRNFVTTRTPTQVASHAQKYFLRLANTVNHNKRRSSLFDTNNTPPTTAAAAAATLSFHFLEQQQTINNSNKPLLSTETTSESSSSSSSSSSMYNNSVPPPDLDLTLAPPPPPNSSSCFPQL 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g02529 238 MobiDBLite consensus disorder prediction 185 238 - -
Adu03g02529 238 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 86 142 IPR017930 -
Adu03g02529 238 PANTHER MYB-LIKE TRANSCRIPTION FACTOR FAMILY PROTEIN 1 208 - -
Adu03g02529 238 Pfam Myb-like DNA-binding domain 93 138 IPR001005 -
Adu03g02529 238 MobiDBLite consensus disorder prediction 219 238 - -
Adu03g02529 238 MobiDBLite consensus disorder prediction 185 215 - -
Adu03g02529 238 Gene3D - 92 143 - -
Adu03g02529 238 ProSiteProfiles Zinc finger CCHC-type profile. 3 20 IPR001878 GO:0003676|GO:0008270
Adu03g02529 238 ProSiteProfiles SANT domain profile. 94 142 IPR017884 -
Adu03g02529 238 SUPERFAMILY Homeodomain-like 88 143 IPR009057 -
Adu03g02529 238 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 89 140 IPR006447 GO:0003677
Adu03g02529 238 CDD SANT 93 138 IPR001005 -
Adu03g02529 238 PANTHER TRANSCRIPTION FACTOR KUA1 1 208 - -
Adu03g02529 238 SMART sant 90 140 IPR001005 -
Adu03g02529 238 ProSiteProfiles Myb-like domain profile. 86 138 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g02529 Adu-Chr3 81008729 81009730 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Adu03g02529 Myb_DNA-binding 7.6e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g02529 - - adu:107479628 387.882
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu03g02529 03 81008729 81009730 Adu03g02529 03 81008729 81009730 ECH