Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g02512 ATGGGAAGAAGTCCATGCTGTGACAAAGCTAACGTGAAAAGAGGGCCATGGTCTCATGAAGAAGATGAAATACTCAAAAGCTACCTCAACAAACATGGCTCTGCTGGTAACTGGATAGCCCTTCCTCTCAAAGCAGGCCTTAAACGCTGCGGGAAAAGCTGTCGTCTGAGATGGCTCAACTATCTCAGGCCTCACATCAAGCATGGAGCTTTCACTGACGATGAAGACAAACTTATCTCCACCCTTTATGCTACCATTGGAAGCAGGTGGTCCCTTATAGCAGCTCAGCTACCTGGAAGAACTGATAATGATGTCAAAAATCACTGGAACACTAAGCTTAAGAAGAAGTTCTTCGCAGGAGGAATAAACACTGCCAATGCCACTACTGTCCTCAACACTGCTTCTCAAAGTTCCCAACTTTCACTCCTCAAGTTGAAGCCTTTGATCATAATAACAACACCCCAACTACTTGTTTTGAGTCTGCTGTTTTGGATTTGTACCAAACACCATTCCCAGTTCCATCAAAAATGCTGCCTTTGGAATCAGACATTTCAGCTACTAATCCCTTGCACGAGCTACTTCATTCTTCTCTCCGTGGCTGCTTCTTCCGCCGCTGCAGCTGCCGCCGTTGCGTCGCACAATCTCTCTCTATCATCCTTTGCATCGCACGAGATCCCTCCGCCGCCGCCGCTCTCGTCGCATCTACTCCCATCGTCGCAGATCTCTCTTTGCCACCGCTCTCATCGCATCTACTCCCTCTGGCTCCTCTTCCATCTAATCTCAACTCGCTCTCTTAGTTCTTCTCTCCCTGAAGAATATAGTACTAAATTTGATGGATCTTCTATTTTGAAGGAGACTGACATTGGGAGGCACGTGAATCAGTTGCGGAAGCATTCCTCCAATGGCGTTCGCAGATTGGTGAAGCTACTTGTGAGGAAGTGGAAGGAAATTGTGGATGAGTGGGTGAGGTTGAATCAATCGGGTGGAACAGCTTCTCTCATGGGTAAAACCAAACCTCAACTCAAATGTTTTGGGACATTTTTCTTAGTTAAGGAATTAGAAATCCAAGTGTTTGATGATAATTATTGGATCTTTTGTAAAGGTAGAGTTAACAACGTGCAGAGAGACTCTTCTTCACAAAGTGTGGAGTTTGGTGACATTGATCTATCTGAGTTTCAAGAAGAGAACCAGGGTGATGATGGTGATAGAAATGATAATGATAGAGATGACGGGGCTGATATTAAAAGAGAAGCTGGTAGTCAAGAGGGAACCAGCAAGCTGCTGGAACAAATGAAAATGCAGCAGATGGATCTAACCCCCAGCCGAAGAAACTTGTTCCAATTTTTCTTGCTTTTGTACAGAAATATGATCCCTAGTAACTTTACAATGAGATTAAATGTGAATCAGCAACTTTCACCGGAGTTGGATCTCTTCATGAAACAGAGGCTCAAAAATTATGAGTTAAAAGGAAGCGAAATCGGAACCTATGATGGAGAGTGTCCCTTCTACTGCTTTTACTCAGGCTATAATGATGAACTTATGTGGGCAGCAACATGGTTATACATGGCTACGAGGAAGCCTGCGTATTTGAAGTACATACAAGAAGAATTGATAAGTGCTAGCGTAACAGAATTTAATTGGGATCTTAAATATGCAGGAGCCCAAATCCTTCTTACCAAGTTGAAGATGGGTATTTGCAACCAGGATGCAGTCAAGCAATTGCAATCCATGATGGAAAATGTCATATGTTGCTCTCAAGATCCAAAAAAGTGCAGCCCATCACATGATAGATTGAATGGGCTGAATCAAGGAGGACCAAGACAAAGAGCAGAAGCTTTGGCTGCTTTAAACTCTGCATTTAAATCATCATCCGGAACCAAAAGTTCTAGTCCTAAGACAACCGGAAGAAGTCATGGATCACAAAGAGCAGCAGCAGTAGCTGCTCTCTCTCAAGTTCTTACTGCTGAGAAGAAGAAACAATCACCTTATTCTTCTCTTGCTGAGAAGAAGAAACAAgaggactatgatgatgatgatgatgatgaagatgacactgaagactatagctga 2070 0.4237 MGRSPCCDKANVKRGPWSHEEDEILKSYLNKHGSAGNWIALPLKAGLKRCGKSCRLRWLNYLRPHIKHGAFTDDEDKLISTLYATIGSRWSLIAAQLPGRTDNDVKNHWNTKLKKKFFAGGINTANATTVLNTASQSSQLSLLKLKPLIIITTPQLLVLSLLFWICTKHHSQFHQKCCLWNQTFQLLIPCTSYFILLSVAASSAAAAAAVASHNLSLSSFASHEIPPPPPLSSHLLPSSQISLCHRSHRIYSLWLLFHLISTRSLSSSLPEEYSTKFDGSSILKETDIGRHVNQLRKHSSNGVRRLVKLLVRKWKEIVDEWVRLNQSGGTASLMGKTKPQLKCFGTFFLVKELEIQVFDDNYWIFCKGRVNNVQRDSSSQSVEFGDIDLSEFQEENQGDDGDRNDNDRDDGADIKREAGSQEGTSKLLEQMKMQQMDLTPSRRNLFQFFLLLYRNMIPSNFTMRLNVNQQLSPELDLFMKQRLKNYELKGSEIGTYDGECPFYCFYSGYNDELMWAATWLYMATRKPAYLKYIQEELISASVTEFNWDLKYAGAQILLTKLKMGICNQDAVKQLQSMMENVICCSQDPKKCSPSHDRLNGLNQGGPRQRAEALAALNSAFKSSSGTKSSSPKTTGRSHGSQRAAAVAALSQVLTAEKKKQSPYSSLAEKKKQEDYDDDDDDEDDTEDYS 689
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g02512 689 CDD SANT 16 62 IPR001005 -
Adu03g02512 689 Gene3D - 481 661 IPR012341 GO:0005975
Adu03g02512 689 ProSiteProfiles Myb-like domain profile. 9 62 IPR001005 -
Adu03g02512 689 MobiDBLite consensus disorder prediction 396 422 - -
Adu03g02512 689 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 117 IPR017930 -
Adu03g02512 689 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 281 327 IPR035441 -
Adu03g02512 689 SMART sant 13 64 IPR001005 -
Adu03g02512 689 SMART sant 67 115 IPR001005 -
Adu03g02512 689 SUPERFAMILY Six-hairpin glycosidases 494 618 IPR008928 GO:0005975
Adu03g02512 689 SUPERFAMILY Homeodomain-like 11 109 IPR009057 -
Adu03g02512 689 Pfam Glycosyl hydrolase family 9 498 668 IPR001701 GO:0004553|GO:0005975
Adu03g02512 689 Gene3D Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 279 330 IPR035441 -
Adu03g02512 689 Gene3D - 69 140 - -
Adu03g02512 689 Gene3D - 7 68 - -
Adu03g02512 689 ProSiteProfiles TFIIS N-terminal domain profile. 254 321 IPR017923 -
Adu03g02512 689 MobiDBLite consensus disorder prediction 674 689 - -
Adu03g02512 689 CDD TFIIS_I 282 319 - -
Adu03g02512 689 Pfam TFIIS helical bundle-like domain 282 318 IPR017923 -
Adu03g02512 689 MobiDBLite consensus disorder prediction 393 422 - -
Adu03g02512 689 MobiDBLite consensus disorder prediction 620 640 - -
Adu03g02512 689 PANTHER OS09G0431300 PROTEIN 1 134 - -
Adu03g02512 689 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Adu03g02512 689 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 62 IPR017930 -
Adu03g02512 689 MobiDBLite consensus disorder prediction 620 689 - -
Adu03g02512 689 CDD SANT 70 113 IPR001005 -
Adu03g02512 689 Pfam Myb-like DNA-binding domain 14 62 IPR001005 -
Adu03g02512 689 Pfam Myb-like DNA-binding domain 69 111 IPR001005 -
Adu03g02512 689 PANTHER OS09G0431300 PROTEIN 1 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g02512 Adu-Chr3 79668636 79676740 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g02512 1 119 MYB Transcription Factor Family AT5G57620 74.790 1.38e-62 210
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Adu03g02512 Glyco_hydro_9 1.6e-14 CL0059
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g02512 K09422 - gmx:778160 232.646