Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g02495 ATGGAAGCTAGTACCGGGCTTTTTGCTGCGACCCATGACAACAATGATCTTGTGGTCATTCAAGGACACAACGAGCCAAGGCCTGTGAAGAACTTAGATGGCCAACTATGTGAAATATGCGGTGACTTAGTGGGACTAACTGTGGACGGAGACTTGTTTGTAGCTTGCGAGGAATGTGGGTTTCCCGTGTGTAGGCCTTGTTACGAGTACGAAAGAAGGGAAGGGACTCAAGTTTGCCCCCAGTGCCATACAAGATACAAGCGTATCAAAGGAAGCCCAAGAGTAGAGGGAGACGAAGACGAAGACGATGTGGATGATATAGAACATGAATTCAAAATGTTGGAAGAAAAGGAAGAGTTGCGGCAAAGGAAGAAGAGTAGCGGATATGATAATGAGAATGCTAAATCAGCATCCTTGGCCAAGTCTAAATCCGAAAATTTTGAACGTCTTCGTGATGTAGGCTATGAAAAATTTGCTGACAAAGAGAGAGCAGATGACTGGAAGTTAAACCAAGGAAATCTATGGCCTGAAACTGAGGCTACAGTTGATCCCGAAAAGGCTATTAGACAGCCACTCTCAAGAAAGGTGGCGATACCATCCGGAAGACTCAGCCCTTACAGGATGATGGTTGCAGCGAGGCTTGTGATTCTCTTGCTATTCTTTCAATACAGAATCTTCCACCCAGTACCTGAAGCAATTGGACTCTGGTTCACATCTGTGGTGTGTGAAATTTGGCTAGCATTGTCATGGCTGGTTGACCAACTTCCTAAATGGTTTCCCATTGATCGCCAGACGTATATTGATCGTCTCTCAATCAGATTTGAACCGGAGGACAAGCCGAATATGCTTTCTCCAATAGATATATTTGTCACTACAGTGGATCCAACGAAGGAACCTCCTCTAGTTACAGCCAATACTGTTCTTTCAATCTTGGCGCTAGATTACCCAGTTGACAAAATCTCATGTTACGTTTGTTTCTataaaaatactatgtgcagagtaaaaattagacatcatatatttgtatataaatatatgtgttttactctttttttatatatatattttatatttcagcatAGAGAATATGAAGAATTTAAGGTGAGGATTAATGCACTTGTGGCCAAGTCCATGAGAGTTCCAGCAGAAGGGTGGACAATGAAAGATGAGACACCGTGGCCGGGAAACAACACCAACGATCATCCAAGTATGATACAAGTCCTTATTGCTCGAGGCGGAGACCACCACCCCGACCAACTTCCCTGTCTTGTATACATATCTCGTGAGAAAAGGCCGGCATTCCAACACCACAACAAAGCTGGTGCCATAAATGCCTTGCTTCGAGTATCAGCAGTGCTAAGCAATGCTCCCTTCGTGCTGAACTTGGATTGCAATCATTATGTTAATAACAGCAAAGTCGTGCGTGAGGCCATGTGTTTCTTTATGGACATCCAACTTGGGAATGGCATTGGCTTTGTTCAGTTTCCTTTAAGATTTGACAGCCTTGACAGGAACGATCGTTATGCCAACAAGAACACTGTTTTGTTTGATATTAACCTAAGGTGCCTAGATGGAATTCA 1580 0.4171 MEASTGLFAATHDNNDLVVIQGHNEPRPVKNLDGQLCEICGDLVGLTVDGDLFVACEECGFPVCRPCYEYERREGTQVCPQCHTRYKRIKGSPRVEGDEDEDDVDDIEHEFKMLEEKEELRQRKKSSGYDNENAKSASLAKSKSENFERLRDVGYEKFADKERADDWKLNQGNLWPETEATVDPEKAIRQPLSRKVAIPSGRLSPYRMMVAARLVILLLFFQYRIFHPVPEAIGLWFTSVVCEIWLALSWLVDQLPKWFPIDRQTYIDRLSIRFEPEDKPNMLSPIDIFVTTVDPTKEPPLVTANTVLSILALDYPVDKISCYVCFYKNTMCRVKIRHHIFVYKYMCFTLFLYIYFIFQHREYEEFKVRINALVAKSMRVPAEGWTMKDETPWPGNNTNDHPSMIQVLIARGGDHHPDQLPCLVYISREKRPAFQHHNKAGAINALLRVSAVLSNAPFVLNLDCNHYVNNSKVVREAMCFFMDIQLGNGIGFVQFPLRFDSLDRNDRYANKNTVLFDINLRCLDGI 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g02495 526 PANTHER CELLULOSE SYNTHASE 1 331 - -
Adu03g02495 526 CDD mRING-HC-C4C4_CesA_plant 35 85 - -
Adu03g02495 526 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 360 526 - -
Adu03g02495 526 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 1 331 - -
Adu03g02495 526 Pfam Zinc-binding RING-finger 27 104 IPR027934 -
Adu03g02495 526 PANTHER CELLULOSE SYNTHASE 360 526 - -
Adu03g02495 526 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 396 526 IPR029044 -
Adu03g02495 526 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 20 110 IPR013083 -
Adu03g02495 526 Pfam Cellulose synthase 360 526 IPR005150 GO:0016020|GO:0016760|GO:0030244
Adu03g02495 526 Pfam Cellulose synthase 286 325 IPR005150 GO:0016020|GO:0016760|GO:0030244
Adu03g02495 526 SUPERFAMILY RING/U-box 21 107 - -
Adu03g02495 526 Coils Coil 97 117 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g02495 Adu-Chr3 77656117 77661948 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g02495 1 526 Cell Wall Biosynthesis AT5G17420 55.932 0.0 622
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g02495 K10999 - gmx:100777270 783.482