Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g02473 ATGCTTCCAAAGAGATTCTACCACCATTCTTGGACCTTCTCTCTGAGGCTTCAAGTTCTTTCACTGTGCTGTGCTGGATCTAAGGCTATCAATGATCCAAAAGGGCATGAGAGTCATGGAGTTCATCTCTGTCACAAATGTGGATGGCCTTTCCCGAATCCACATCCAAGTGCCAAGCACAGGCGTGCTCACAAGATGATCTGTGGAACCATTGAAGATTACAAGCTATGTTCCTCCGAGGAACAATCTCGCTCAAACGGCTCAGATGATGGACATGGTTCTGATAATGATAAAAAATCCCCAGGTCCAGAGGTCTTGAATATAGGCAACAAGGAGAAGGGTGATAGTGGAATTGGAGATAAAATAAATAGATCAGAAGATGAGGCGTTTTCAGATGCAGTTGCAGACTTTCCAGATAGTCAAGGAGTTAAGGAATCTCTGCAGGAAGGTAGTTTGGACTTAAGTACCAGTATGGAATGGGACGGCAAAGATGATCCAAAATTTTCAGAGTCTTCCAAGGACAGTGATTTTAATGAGAGGCCATTGGAGCTTATAGATGAATCTTTAACTGACTCAGTTGCTGCAGCAGAATCTGAAGTGCTAAGATGCATTCACATAGGGCTTTTATGTGTACAAGAGAGACCAGAGAATAGGCCAGACATGTCAGCCATAGTTCTAATGCTGAATGGTGAGAAACCATTACCAAGGCCAAGGGACCTGCTTTTTATCCACATCAGTTTGGCTTTTCATCAGGGAATTGTGTAG 765 0.434 MLPKRFYHHSWTFSLRLQVLSLCCAGSKAINDPKGHESHGVHLCHKCGWPFPNPHPSAKHRRAHKMICGTIEDYKLCSSEEQSRSNGSDDGHGSDNDKKSPGPEVLNIGNKEKGDSGIGDKINRSEDEAFSDAVADFPDSQGVKESLQEGSLDLSTSMEWDGKDDPKFSESSKDSDFNERPLELIDESLTDSVAAAESEVLRCIHIGLLCVQERPENRPDMSAIVLMLNGEKPLPRPRDLLFIHISLAFHQGIV 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g02473 254 MobiDBLite consensus disorder prediction 136 179 - -
Adu03g02473 254 ProSitePatterns Zinc finger C2H2 type domain signature. 44 64 IPR013087 -
Adu03g02473 254 MobiDBLite consensus disorder prediction 158 179 - -
Adu03g02473 254 MobiDBLite consensus disorder prediction 85 99 - -
Adu03g02473 254 Gene3D Transferase(Phosphotransferase) domain 1 154 239 - -
Adu03g02473 254 PANTHER PENTATRICOPEPTIDE REPEAT (PPR) SUPERFAMILY PROTEIN 32 178 - -
Adu03g02473 254 PANTHER PENTATRICOPEPTIDE REPEAT (PPR) SUPERFAMILY PROTEIN 32 178 - -
Adu03g02473 254 MobiDBLite consensus disorder prediction 79 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g02473 Adu-Chr3 74257140 74259488 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g02473 178 242 Receptor kinase-like Gene Family AT4G11480 48.529 1.59e-12 65.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Adu03g02473 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g02473 - - aip:107644337 292.737