Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g02467 ATGCAGGATCGTTCCAACGCAGCTGCCCTCCCATCTACGATCACGGCGCCGCCCTCTCATCTGCACACAACGCAGCACGGCTGCCCCATGCAGGATCTTTCCAAAGCAGCCGCCCTCTCATCTACGATCGATAGGGCCGCCATCTCATCTGCACACAACACAGCCGGTGTTCACTCCTTCAGAATGGCAGAATCGCAAGAAGAACGTGCTGCAATGGAGGGTCCTCATTTATGCACATCACCTAGCCGAAATTCATTAATGGAGGTTGATATAGTTGAACCGTTAGTTTGTGTTGCCTCTGAAGTTTCTGAAAATTTATCAAACGAACAAGAAAACTTAGCCGCCAATGTCGCAGAGCATGGTCACAAGTTAAACAAGTTGTCGGATGTTATGGATGTTGGAAGTGAAGAGATGGAGCCTGGTGATGAGTTACCAGATCATGGTAACCTACAAGAAGATGAGATACCAAGAGTTGGAATGCGATTTCCTCAGCTACAGATGGCGCATGACTTTTATGTGTCCTATGCAAAGAAAGCTGGATTTGCAACTAAGATAAGGACGACAACATTTGACAAGATCACAAAGGCTCCCATTAACCAGGCTATACACTGTAATCGCGATGGGATCCGCGAGTCTCGTGTTAAAGCACCAACACGGAAGAATACGATTTCAGCTGCTGGGTGCAAGGCAAGGATATATCTAAAGTTTGATAAAGACGTGCAAGACTGGGTTCTGCTCAAGGCTGACTTGACGcactctcacccttgttcaccgaagaaggcagtgcactatcatgagtataggcagttgaccatgcatgcgaaAGTTTCTACAGTTGATGAACAGGGTCCAGTGGTCTGCGTGAAGGTGGAAGAGGAGAAACTACTCAACGATACTATTCTATGCGTTCCGTATGATGTTCACTTTGACCGTTCCACACATGAGCTTCGTTGTGAATGCAATCTTTTTGAGAGTTCagATGAGAGTCATGTTGCATTTAGGAAACTGTGTGCACACTTCTATAATGTTGCTCAAGAGTTCCTCGGTGATGATGAAGAAACAGCATTGCTGCATCTTGCTTTGGAAGAAACAAGGGCCAAGTTGGCTACGCACCGTGCCAAAAAGAGGTCCGAGAGCATGGCAGAGACTCAGACCAACATTGGCTCTCAGAGTTCGAATGATGTCGGTGTTGATGACATCCAAGGCCCATCGAAGGTCACCACAAAAGGCAGGCCAAAGAGTAAGAGGCTTGGCTCTGCCCTTGAGAAGTCCATCAAGAATTCAAGACGGAGAAAACAAAAGAATTCACATCCGGTGGTTCGTCCGCACACATTTCAAGATATAAACCATTGTGATGTTTCTAGCCTGGATGTTCCCAAACAAGACGGTGGTTTCATGTCTTTGTTAAGCTCCTTCAACCAAAAATGGGATTAG 1434 0.4407 MQDRSNAAALPSTITAPPSHLHTTQHGCPMQDLSKAAALSSTIDRAAISSAHNTAGVHSFRMAESQEERAAMEGPHLCTSPSRNSLMEVDIVEPLVCVASEVSENLSNEQENLAANVAEHGHKLNKLSDVMDVGSEEMEPGDELPDHGNLQEDEIPRVGMRFPQLQMAHDFYVSYAKKAGFATKIRTTTFDKITKAPINQAIHCNRDGIRESRVKAPTRKNTISAAGCKARIYLKFDKDVQDWVLLKADLTHSHPCSPKKAVHYHEYRQLTMHAKVSTVDEQGPVVCVKVEEEKLLNDTILCVPYDVHFDRSTHELRCECNLFESSDESHVAFRKLCAHFYNVAQEFLGDDEETALLHLALEETRAKLATHRAKKRSESMAETQTNIGSQSSNDVGVDDIQGPSKVTTKGRPKSKRLGSALEKSIKNSRRRKQKNSHPVVRPHTFQDINHCDVSSLDVPKQDGGFMSLLSSFNQKWD 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g02467 477 ProSiteProfiles Zinc finger SWIM-type profile. 305 348 IPR007527 GO:0008270
Adu03g02467 477 MobiDBLite consensus disorder prediction 380 398 - -
Adu03g02467 477 MobiDBLite consensus disorder prediction 1 27 - -
Adu03g02467 477 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 101 380 - -
Adu03g02467 477 MobiDBLite consensus disorder prediction 370 445 - -
Adu03g02467 477 Pfam FAR1 DNA-binding domain 170 257 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g02467 Adu-Chr3 73390005 73393913 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Adu03g02467 FAR1 1.3e-13 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g02467 - - ahf:112733025 375.941