Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g02466 ATGGAACAACACACCGAAGGACGTGCTCTTCTAGGAGTATTTCCAAGTAACATTCTCCTTGCTTTACTACCTTCTGGCCTACCTGCCACTCAGTACAGTTCTGTAACTTGGGGAAATCCATCAGGTTTTCAACAAGAGGAAGAGATGAGTGACCCTGGTGCTCAACGAGTGAACCCAACTACAGGCCAGCCACCAAGGCCAGCTTCTGTTTTTCTATCTGATGAAGGACTTCAAAAACAGCAAAATTTCAAGAAGCCTCAGAAGTTGATAAGAAGACTCATGCTGATTGTATCCAATCAGACCTTGATGAACTGTGAAGAAGGTCCTGTTGTGGCAACTGAGCAAGTAGCTCCTGCCATCGGCGAGCCAATGGATATCATGACTGCCTTACAGCTAACACTTAGGAAGTCACTTGCTTATGGTGGTCTTGCACGAGGCCTTTATGAGGGTGCCAAGGTGATCGAGAAGTGCACTGCTCAGCTCATTGTTCTTGCCGAGGATTGTGACCAACCTGACTATGTTAAACTCGTCAAGGCCCTTTGTACTGAGCATTTGTGA 558 0.4659 MEQHTEGRALLGVFPSNILLALLPSGLPATQYSSVTWGNPSGFQQEEEMSDPGAQRVNPTTGQPPRPASVFLSDEGLQKQQNFKKPQKLIRRLMLIVSNQTLMNCEEGPVVATEQVAPAIGEPMDIMTALQLTLRKSLAYGGLARGLYEGAKVIEKCTAQLIVLAEDCDQPDYVKLVKALCTEHL 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g02466 185 MobiDBLite consensus disorder prediction 38 69 - -
Adu03g02466 185 ProSitePatterns Ribosomal protein S12e signature. 129 147 IPR000530 GO:0003735|GO:0005840|GO:0006412
Adu03g02466 185 PANTHER 40S RIBOSOMAL PROTEIN S12 110 184 IPR000530 GO:0003735|GO:0005840|GO:0006412
Adu03g02466 185 SUPERFAMILY L30e-like 121 184 IPR029064 -
Adu03g02466 185 Gene3D - 111 185 IPR029064 -
Adu03g02466 185 Pfam Ribosomal protein L7Ae/L30e/S12e/Gadd45 family 129 184 IPR004038 -
Adu03g02466 185 PANTHER 40S RIBOSOMAL PROTEIN S12 110 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g02466 Adu-Chr3 73384231 73385233 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g02466 120 184 Cytoplasmic Ribosomal Protein Gene Family AT1G15930 73.846 1.53e-28 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g02466 K02951 - adu:107479238 168.703