Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g02371 ATGGAGAAGGAAGTTGATTTCTCCGTCCAATGGACTGATGGATGGAGCATGGACTCAACAGATGACGATGAAGGAAGTGTTGCACAGTCTCTACAGACAGAGGAAGGGCAATCGGTAGCGGGGGATAGAGAAGATGGTTCAGTGGCTGGTGATGAGGGTTCCATGCCGGTACCAACAAGAATACACGTTGTGGCTGACAATCCATATGGTGACAAAGAATTGGGATTAACGGTTTTAATTGCCGCCGCATTGGAATTAGCCGAGTATAATAGTGTGGAAGAGGCGTACAAAGCATCTGTGGCTTTTATGAAAGCGACTGGATTCGCTGTACGAAAGGGTGATTCTGTGAAAAATGAGGAAGGGAATATCGTGCGGAAGTTCTTTTATTGCAATCGACAAGGTTTGCATGAGAAGAAGCACTATGAGAGGGTCAATAGGAAGAGGGCTCATAAAGCAGAGACTAAAACCTATTGTTATGCCAAGTATGTTGTATACTTGGACATGAGTTCTAGAAAGTGGAGGATGAAAACGTTTATTGTGGATTATAGTCATGATTTGGCCCCACTAGATTTCACCAACGTAATGGCGCCGCATCGGAAGCTGACTGATGGAAATAAAGCTCACATACACAGCATGCAAGAGGCTGGATTTCAGACAACTCAAATCATGGGGTTCTTTGCTCACTTGTGTggcttgcgaacaacatccaaatgtgagGGCATCGACTCATCATTAAAGAAATTTATAAAATCTGAAAATTGCCTGCTTGAGCTGGTAGAGAACCTGGATCGTGTTGTTAAAGATTACCGCAACAACGAGTTCATTGTGGATTACAAGTCATTGTATACTGATCCTGTGCTGATGACCGGATTGGAGTCTCTTGAGCGGTTGGCTAGTAAGTTGTACACAAGAAAAATATTCTTCGAGGTAAAGGAACAAATCGAGAGTGTTGGTGGGATGATTGTACTGTACAAGGATAGGTTTGGTAGCATTGAGAAGTTTATGCTGAGGAAGTTTAGAAAGCCACATCGTGTCTATGTGGTGCTATATGATAAGAGTTCTGACAAGTTCGAGTGTTCATGCAAGTTGTTGAATAGTGTAGGAATTCTTTGTGGTCACATATTCTGCATTCTAAAAGAGCTGGACATAGAAGAGTTGCCCAATCGATTGGTTCTTAAGAGGTGGTGTAAAGATGCCAAATCTGATATAATTAGCACAATAGAGGTCCAGTCAGATCTGGACCGGGCATTTCGTATTAGGTACGGTGTATTGTGGGCTGCTTGTTTGAAGATGTGCTTCTTGGCAGCACAGGGTTCAGAAACCTACGAAAAAGTGGTGAATATAGTTGCGAAGATGTCAAACGAGTTAGAGTCCATGTGCTACATAGGCGACAAGGGTGGACATGCACATCTTGTTGGAAATGACATTGACTTTGGAAATCCTCATATCATAAGGTCAAAAGGTGCTCCTCGAGGCAACACTAATGCAAAGAATGGGAGACGTTGCAGAAGGTGCTTTAGGAATCAGTTTCTAGGTCGAGGAGAACCCAGAACCGTGGCTGGAAAAGGGGCCGGGATACATAGTATTTGCAAAATCAATGTTGGTTTGTTGGACATGAAGTATGTTCCATTGTCTTGTGGTCCTTTCGGCTGA 1653 0.4259 MEKEVDFSVQWTDGWSMDSTDDDEGSVAQSLQTEEGQSVAGDREDGSVAGDEGSMPVPTRIHVVADNPYGDKELGLTVLIAAALELAEYNSVEEAYKASVAFMKATGFAVRKGDSVKNEEGNIVRKFFYCNRQGLHEKKHYERVNRKRAHKAETKTYCYAKYVVYLDMSSRKWRMKTFIVDYSHDLAPLDFTNVMAPHRKLTDGNKAHIHSMQEAGFQTTQIMGFFAHLCGLRTTSKCEGIDSSLKKFIKSENCLLELVENLDRVVKDYRNNEFIVDYKSLYTDPVLMTGLESLERLASKLYTRKIFFEVKEQIESVGGMIVLYKDRFGSIEKFMLRKFRKPHRVYVVLYDKSSDKFECSCKLLNSVGILCGHIFCILKELDIEELPNRLVLKRWCKDAKSDIISTIEVQSDLDRAFRIRYGVLWAACLKMCFLAAQGSETYEKVVNIVAKMSNELESMCYIGDKGGHAHLVGNDIDFGNPHIIRSKGAPRGNTNAKNGRRCRRCFRNQFLGRGEPRTVAGKGAGIHSICKINVGLLDMKYVPLSCGPFG 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g02371 550 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 87 210 IPR031052 GO:0006355
Adu03g02371 550 Pfam FAR1 DNA-binding domain 102 187 IPR004330 -
Adu03g02371 550 PANTHER PROTEIN FAR1-RELATED SEQUENCE 5-LIKE 87 210 - -
Adu03g02371 550 PANTHER PROTEIN FAR1-RELATED SEQUENCE 5-LIKE 225 478 - -
Adu03g02371 550 ProSiteProfiles Zinc finger SWIM-type profile. 346 382 IPR007527 GO:0008270
Adu03g02371 550 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 225 478 IPR031052 GO:0006355
Adu03g02371 550 MobiDBLite consensus disorder prediction 1 55 - -
Adu03g02371 550 MobiDBLite consensus disorder prediction 12 37 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g02371 Adu-Chr3 57689814 57692415 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Adu03g02371 FAR1 1.6e-10 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g02371 - - adu:107479516 641.343