Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g02355 ATGCAAAAAATCTTCACTGGAGTTTCAAAGTCTTTGTCGTTAGGGCATGGGAAGTTCCGAGTAGATTTAATGACAAGGAGTAAAGAACCTAATGTGATTAAACGTGTGCACTGTGAATGGCAGGGTCATAGGTTGCAAGCTTCGATACCAAAGCCATTGGTTAAGAAGTGGAAGGATGTCATAGTGGAGTTTCAGATGTACACGATGAAAAATTTTGTTGTTTTGGATAACACTACATACCCCAAGGTAACTCCGGATAAATATATATTGGTTTTCTCACACTGGACCAGGGTTCATCATGTTGAACATCCAAGCTTTCCACTTGATGCCTTTCGCTTGAAGTCATTTAAGGAATTGCTTACGGCTGATAAGTTGGACGACTCTGAACTTATTGATATAATTGGTAAAGTAGTAGGCAAAGAGGATCCCAGGGATTTGGTAACTAGCAAAGGGGTGGAGACTAAACGTTTGGCCAAAATCCTACAAGATTTAGACAACAATAAGATTAGTTGTGCTCTGTTTGGTAAAATGGTAGATGAGCTTTTACCTCATCTTCACGATGGAAGGGTTGAACCTCTCATTGTAGTGCTCCAGTATTTTAAACCCAATAGATGGAATGGTAAAACATCTGTCCAGAGTCATTTCTATGTTTCCAAGCTGCACATCAATGATGGTTTAAAAGAAGTTGTTGGATTCCGAAATAGATTGCTTAGCGGAGTGGCTGTAAGTTCCTCAAGGATTAGCCAAGTTTCATCTCAAGGGGGATGGTCTGGAGCTGATGAGATAAACCAAGGTGCTGTTTTGGTGAAGACTATTGAGCAAGCACTTAATGTTAAAGAGGAAGGTCCGATATGGATATGTGCAAGCATTGTATCTTTAAATGTTGGCAAGGATGATTGGTTTTACAAATCATGCAGGAAATGTCCAAAAAAAGTTGATACTCCTATTGGAAATAGATATGAATGTACCAAGTGTGGACACACTCATGGTTGTGCTTCTTTGAGGTTCAAGGTACAGGTCTTGGTCCACGATGGAACTGGGAGCATCACCCTCTTACTTTGGGATAAGGAAACAACTCAACTTTGCGGAAAGAGAGCTGAACAAGTAATGGAGAATGATGTTATAGGTGACGATGCTTATCCACCCACCTTTGTTAACATGATGGATAGGAAAGTTCTATTTAAGATTAATGTGAAGTCTGCTAATATCAAGGGTTTTGATCAAATATATACTGTTATGAAAATTTGTGATGATGAGGATATCATTGAGAAGAATATACCTAAGGAGATTGCTGAGAGTACATCTACATTTGTTACTGAAATTGGGGGCAGCAACTCCTTGGACATGTCAGAAAATATTGTTAATATTAAGTCTGATACTGATCCTCAGTTTACACTGGATGGAATGGAGGAGTGTATATCAACCCTCAAATGCAAAACTCCTGGTAAGAGAACTGCCAGCCTTTTAAATCCAGTCAATCAAGGAATGAATGAGAATGAGAATGAAAACGAAGGACAACTGTCAACTAATAGAGGTGGCAGGAAGGGTGTAAAGAGGATCAAGGCAAATATGGGTCAACTGGAGCattacaacaacaacaacaacaaagccttgtcctactaa 1623 0.3857 MQKIFTGVSKSLSLGHGKFRVDLMTRSKEPNVIKRVHCEWQGHRLQASIPKPLVKKWKDVIVEFQMYTMKNFVVLDNTTYPKVTPDKYILVFSHWTRVHHVEHPSFPLDAFRLKSFKELLTADKLDDSELIDIIGKVVGKEDPRDLVTSKGVETKRLAKILQDLDNNKISCALFGKMVDELLPHLHDGRVEPLIVVLQYFKPNRWNGKTSVQSHFYVSKLHINDGLKEVVGFRNRLLSGVAVSSSRISQVSSQGGWSGADEINQGAVLVKTIEQALNVKEEGPIWICASIVSLNVGKDDWFYKSCRKCPKKVDTPIGNRYECTKCGHTHGCASLRFKVQVLVHDGTGSITLLLWDKETTQLCGKRAEQVMENDVIGDDAYPPTFVNMMDRKVLFKINVKSANIKGFDQIYTVMKICDDEDIIEKNIPKEIAESTSTFVTEIGGSNSLDMSENIVNIKSDTDPQFTLDGMEECISTLKCKTPGKRTASLLNPVNQGMNENENENEGQLSTNRGGRKGVKRIKANMGQLEHYNNNNNKALSY 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g02355 540 MobiDBLite consensus disorder prediction 491 510 - -
Adu03g02355 540 SUPERFAMILY Nucleic acid-binding proteins 113 236 IPR012340 -
Adu03g02355 540 Pfam Replication factor-A C terminal domain 295 415 IPR013955 -
Adu03g02355 540 MobiDBLite consensus disorder prediction 491 515 - -
Adu03g02355 540 CDD RPA1_DBD_B_like 132 236 - -
Adu03g02355 540 Gene3D - 105 242 IPR012340 -
Adu03g02355 540 CDD RPA1_DBD_A_like 41 98 - -
Adu03g02355 540 Pfam Domain of unknown function DUF223 41 116 IPR003871 -
Adu03g02355 540 CDD RPA1_DBD_C 269 415 IPR013955 -
Adu03g02355 540 PANTHER REPLICATION FACTOR A 1, RFA1 26 423 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Adu03g02355 540 Gene3D - 19 103 IPR012340 -
Adu03g02355 540 PANTHER BNAC07G49340D PROTEIN 26 423 - -
Adu03g02355 540 Gene3D - 251 427 IPR012340 -
Adu03g02355 540 SUPERFAMILY Nucleic acid-binding proteins 270 417 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g02355 Adu-Chr3 56410940 56413585 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g02355 39 369 Core DNA Replication Machinery Family AT2G06510 21.229 9.75e-10 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g02355 - - adu:107477039 868.226