Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g02346 ATGGCCAGAACCCCGTTATTATTCACTTCATTGTCATTGCTTTTCACTCAGTTCCTATTCACCCCATTTGATGCTGTTCTTGGTTCAAAAGGATCACTTGAATGCCTTAAAGTTTCTCATGCCGAGTTCACTAACTCAGCGAAAGAAGTTGTTGGTGTCTTGAAAAGTGTTACATCCACTCTGCATTCTGAGTTTGTTAGAAATGGCGGCGGCTTTGTCGATGATCATCGCCTTTCGAGCGCTGTTTCGGCGTGCCTTGAGTTGATGGACTTGTCCTCCGATGAGCTCAGCTGGGTTGTGTCCGTTTCTGAAAGTCCCAAAGGCAAGCATAACGGCACTGGTAATTTGAGCTCTGATTTGAGGACATGGCTAAGTGCTGTTCTTGCCAACACGGACACATGCATGGAAGGATTAGAAGAAGGCACCACCAGCAGTGTCAATAATATAAAGAATGCAGTAACCGCTTCCATCAACAAAGTGAACACAATGGTCCAGGATCTCCTAACACAGGTGCACCCTGTTTCGTATAACAGGGTGAGCAAGAGCAAACTTGAGTTTCCTTCTTGGGCCGAATCAGAGGATCTTGAGGGTAAAAAGTTGCTAATGGCGGTGGATGCCGTGGTGGCTTTGGATGGGAGTGGGGACTACACACGTGTGAAGGATGCTGTGGAATCAGCGCCTGAGTATAGCATGAAACGTTATGTGATACACATTAAGAAGGGTGTGTATTGTGAGAAAGTTGAGATCCATAGCAAGAAGTGGAACCTTGTGATGATTGGAGATGGAATGGAGAATACCGTTATCACTGGTAACTCGAGTCGTTATTTCAATAATACCACCACATACATGACTGCAACCTTTGCTGTGGAAGGCAGAGGGTTTATAGCACAAAACATTTCCTTCCATAACACTGCAGGACCAAGAGGGAGCCAAGCAGTAGCTCTAAGATCACAATCCGATCTCTCAGTCTTCTACCGCTGCGAAATCTCCGGCTACCAAGACAGCCTCTACGCCCACTCCAACCGCCAATTCTACCGAGAGTCCATCATCACCGGCACTGTAGACTTCATCTTCGGCCGCGCCGCCGCAGTCTTCCAGAACTGCACCATACTTGCCAAGAGAGGCTTACCGGAACAAACCAACACCATAACCGCTCAAGGCGCAAACGACTCCACCTCACCCTCCGGCTTCTCCATCCAATTCAGCAACATCTCTGCACATTCTGAACTTCTACCTTTCTTGAACTGCACAAGAACGTACCTTGGGAGACCATGGAAGGAATATTCGAGAACGGTTTTCATGCAATCTTACATGAGCGAGATGGTGAGCCCGCAAGGGTGGAAAGAATGGAATGGGACGTTGTATTTGGACACTCTTTACTATGGTGAGTTCATGAATTATGGGCCTGGATCTGGGCTTTCTGAGAGAGTGAAGTGGCCAGGGTATCATGTTATCAATGACTATGATGAAGCTAGTAACTTCACGGTGGCCCAATTTATTCTGGGGGATCTATGGTTGCCATCAACGGGTGTGAATTATGCATCTGGTTTCACTAAATATTACGGAAAGAGCAAACTCGCCTCCCTCTCCGCATGTGAGTTCTCTTCATCTCTTCCATTTTCATTGGTGCCGCTTCACTTCCTCGCTCTCCGGTCCGATGCTACCCAGACTCCAGCACAAACACCGAGCACAAGCGCCATCACCGTCTAA 1710 0.476 MARTPLLFTSLSLLFTQFLFTPFDAVLGSKGSLECLKVSHAEFTNSAKEVVGVLKSVTSTLHSEFVRNGGGFVDDHRLSSAVSACLELMDLSSDELSWVVSVSESPKGKHNGTGNLSSDLRTWLSAVLANTDTCMEGLEEGTTSSVNNIKNAVTASINKVNTMVQDLLTQVHPVSYNRVSKSKLEFPSWAESEDLEGKKLLMAVDAVVALDGSGDYTRVKDAVESAPEYSMKRYVIHIKKGVYCEKVEIHSKKWNLVMIGDGMENTVITGNSSRYFNNTTTYMTATFAVEGRGFIAQNISFHNTAGPRGSQAVALRSQSDLSVFYRCEISGYQDSLYAHSNRQFYRESIITGTVDFIFGRAAAVFQNCTILAKRGLPEQTNTITAQGANDSTSPSGFSIQFSNISAHSELLPFLNCTRTYLGRPWKEYSRTVFMQSYMSEMVSPQGWKEWNGTLYLDTLYYGEFMNYGPGSGLSERVKWPGYHVINDYDEASNFTVAQFILGDLWLPSTGVNYASGFTKYYGKSKLASLSACEFSSSLPFSLVPLHFLALRSDATQTPAQTPSTSAITV 569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g02346 569 Gene3D Invertase/pectin methylesterase inhibitor family protein 35 172 IPR035513 -
Adu03g02346 569 ProSitePatterns Pectinesterase signature 2. 350 359 IPR033131 -
Adu03g02346 569 CDD PMEI-like_4 18 175 - -
Adu03g02346 569 PANTHER PECTINESTERASE 181 517 - -
Adu03g02346 569 SUPERFAMILY Pectin lyase-like 202 515 IPR011050 -
Adu03g02346 569 PANTHER PECTINESTERASE 38 175 - -
Adu03g02346 569 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 74 165 IPR035513 -
Adu03g02346 569 Gene3D - 201 517 IPR012334 -
Adu03g02346 569 Pfam Plant invertase/pectin methylesterase inhibitor 38 155 IPR006501 GO:0004857
Adu03g02346 569 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 44-RELATED 181 517 - -
Adu03g02346 569 Pfam Pectinesterase 205 503 IPR000070 GO:0030599|GO:0042545
Adu03g02346 569 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 44-RELATED 38 175 - -
Adu03g02346 569 SMART PMEI_2 39 170 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g02346 Adu-Chr3 55454899 55459147 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g02346 33 517 Carbohydrate Esterase AT3G43270 54.781 0.0 561
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g02346 K01051 - gmx:100798620 574.318
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu01g01958 01 86369016 86372429 Adu03g02346 03 55454899 55459147 PCT