Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g02340 ATGATGAACTCCAATGTTTTAAATCTCATGATTTTTGAATCCTGGAGGAACTTGGAGTTCTTGATTGGAAGAAGAGTGAGATCCAACGAAACCCTAGATCTACTCGCCGCCATTGTCACCGTCAAGCTCGCCGTAGCGTCTGAGATCAGAGGGGAAGTAAGCTCGTCGCTGCTGCCATTCTCGCCGTTGCTGCCATTCATGTCCTCATCGTTGTCGCAATCAAGCTTCTACATCAAACGCATGAATCTCACCGCAGTCAAAGACGCCGACGAAGTCATGGAGAGGCACGTCGAGGACTCGCTCGCGATCCTCCTTCCTCTTAGGGATTGCTACCGCACGCGCTACGGCGACACTCCGTCACATGAGAAGCTTAGCCTCGTAGACATTGGAACAGGTGCTGGTCTTCCCAGAGTTGTTTTGGCCATAGCTTGTCCAGAATGGGAAGTTACGCTGATAGAGTCCATGAACAAGAGATGCGTATTTTTGGAGCATGTTGTTGGAATCATCGGTTCATCAAATATCCAGATAGTAAGAGGAAGAACAGAGAGTGCTACAAAAAAAATTGAGATCCTACAAAAGAAATTGAATGAAGCTCAAATGACCATCCAAATGAAGAGGAAAGAAGCCAAGGATCAAATAGAGAGGCACACAAAAGCAGAATGGGCAATATGTTTATGCAATAGTAGGGACACTTGGTTCACTGAAAATTCTCCAAACATCAAGAACAAGGTAATTGCGGTGGCTGTTGGAGATTGGTATTTCGACCGCGCAGATCATGACCCCTATTTTCAGGATGAGATGGCGGGTGTAATCTCCGTTAGAAGCAAACAGCGAATGCCACTACAGTTGAAAGAAGGATTCAGCAAGACAAGAGACTTCAGTGTATTTGAGCATTTTATCAGAAAGCACCGATCCCCTAGTGACAATTCTTTAAAGTTCTACTCTTATTTGAGTTTCTATAAGCCCCCCAATATAAGTCTGCCTTATCGAATTGAGAATTCTCTGCATAATCTATCAATAACTTACTACCAAAAGGGTTTATTAGAGCCAGAGGTTCTTGGACCAGGATCAAATGCAAATTATGCCTGGGATGATCTGACTCTTCCACATAGGCTGGTTGTTCGCATCAATGGGCATTCTTTATGCTGGAAATGA 1155 0.4442 MMNSNVLNLMIFESWRNLEFLIGRRVRSNETLDLLAAIVTVKLAVASEIRGEVSSSLLPFSPLLPFMSSSLSQSSFYIKRMNLTAVKDADEVMERHVEDSLAILLPLRDCYRTRYGDTPSHEKLSLVDIGTGAGLPRVVLAIACPEWEVTLIESMNKRCVFLEHVVGIIGSSNIQIVRGRTESATKKIEILQKKLNEAQMTIQMKRKEAKDQIERHTKAEWAICLCNSRDTWFTENSPNIKNKVIAVAVGDWYFDRADHDPYFQDEMAGVISVRSKQRMPLQLKEGFSKTRDFSVFEHFIRKHRSPSDNSLKFYSYLSFYKPPNISLPYRIENSLHNLSITYYQKGLLEPEVLGPGSNANYAWDDLTLPHRLVVRINGHSLCWK 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g02340 384 Pfam rRNA small subunit methyltransferase G 79 189 IPR003682 GO:0005737|GO:0006364|GO:0008649
Adu03g02340 384 Pfam Pectinacetylesterase 185 257 IPR004963 GO:0016787
Adu03g02340 384 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 79 184 IPR029063 -
Adu03g02340 384 PANTHER S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASES SUPERFAMILY PROTEIN 79 190 IPR003682 GO:0005737|GO:0006364|GO:0008649
Adu03g02340 384 Coils Coil 181 215 - -
Adu03g02340 384 Hamap Ribosomal RNA small subunit methyltransferase G [rsmG]. 46 248 IPR003682 GO:0005737|GO:0006364|GO:0008649
Adu03g02340 384 Gene3D Vaccinia Virus protein VP39 75 226 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g02340 Adu-Chr3 55062991 55066998 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g02340 171 257 Carbohydrate Esterase AT1G57590 36.782 4.56e-09 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g02340 K03501 - aip:107647117 174.866