Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g02316 ATGGCCAAAGGTGGAGGAAAACTAATGAAGCTCAAGTCAGTGCTCAAGAAATGGAACTCATTCGGCAACATCACCACCACCACCACCACCAATAAGCAGAGCCGTTGCGGCGCCACCGTGAGCGCCGTAGCTAACAACGAACAATCCTCCGTGTCGGAAGCCGATTTCCAGCCAGTGTATGTGGGGAAGACGTTGCGGAGATACTTGGTGAGGCCGGACGTGGTGGAGCATCCACTTTTCCGAGAGCTCGTGGATAGATCACGTGAGTCCTACGACGACAACAACTTCGTCGTCGTGGAGGAGGACACTGTCCACGTGGCATGCGAGGTCGTGCTGTTCGAGCACCTGCTTTGGATGCTAGAAAACGCTGATCCTCAACCTGAGTCACTCGACGAGCTCGTCGAATTCTATACTTGCTAG 420 0.5405 MAKGGGKLMKLKSVLKKWNSFGNITTTTTTNKQSRCGATVSAVANNEQSSVSEADFQPVYVGKTLRRYLVRPDVVEHPLFRELVDRSRESYDDNNFVVVEEDTVHVACEVVLFEHLLWMLENADPQPESLDELVEFYTC 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g02316 139 Pfam Auxin responsive protein 15 120 IPR003676 GO:0009733
Adu03g02316 139 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 5 139 IPR003676 GO:0009733
Adu03g02316 139 PANTHER SMALL AUXIN-UP RNA-RELATED 5 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g02316 Adu-Chr3 53384255 53384827 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g02316 4 135 Calmodulin-binding Proteins AT3G43120 25.157 4.72e-08 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g02316 - - mtr:MTR_2g044020 146.747
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu03g02316 03 53384255 53384827 Adu03g02316 03 53384255 53384827 ECH