Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g02289 atgcgcgggtcgaatatagTTATCACCCTCGGGCGTCATTCATTGACTACCACCGGCGTCCATCCCCTTCTCACTGGCCGTCATCGTCTTGTGCTGCCTGGTGTCCTCAGCTACACTAAAAATTTCTCTCGTTCTTTGTGGTTACTGGTTCAACGCACTCGCCGCTTCGTTCGTTGCCACCGAGAAAGCTCGTCGGTTTCTAGCTTCTCTGTTCTAGCCGGTTCCCTGCTTCTCCAATCTCTCTGGTATTTCTCGCCTCTGTTCGTGTTCCTAGTTCTAGTTTCCACAACCTTGGTTCAAAATTTTGGCAGCCCATCTATATTTTCCGGATCCGGTCGCTCACTCTTCTTCCACGAAGTGCTTAAGTTTTGGTCAATGGCGACAGCTCAGCTAACAGCATGCTCAATTTCCTCGAGGAATGTGTCGTCGTTCGAAGGGCTTCGACCTTCGGCGGTTCAGTTCCCCTCCGTCGTCAGAATTGGAACCCTCACTCAAAGGTCCTTCCGGGGTTTGGTTGTCAAAGCCGCCACTGTTGTTGCTCCAAAGTACACTGCTATTAGGCCTCTCGGCGACAGAGTACTGGTTAAAATTAAGGAAGCAGAAGAGAAGACCGACGGAGGAATTCTACTTCCTTCAACTGCTCAAACAAAACCACAGGGTGGTGAGGTTGTTGCTGTTGGAGAGGAGAAATCAGCTGGGAAGAGCAAAATAGAAACTAGGGTTCAGATTGGTGCGCAAGTTGTGTATTCGAAATATGCTGGTACTGAGGTGGAGTTCAATGGTGCAAAGCATCTTATACTGAAGGACGATGACATTGTTGGTATCCTCGAGACCGATGAGATCAAGGATCTTAAACCGATGAATGATAGAGTCTTAATACAGGTTGCACAAGCAGAGGACAAAACTGCAGGTGGTTTGTTGCTTACCGAAGCAACCAAGGAGAAACCTTCTATCGGAACGGTAATTGCGGTCGGCCCAGGGCCTCTTGATGAGGAAGGTAACAGAAAACCGTTGTCTGTTAATCCTGGGAACACAGTCTTGTACTCCAAATATGCTGGGAACGACTTCAAGGGAAAAGATGGTTCTGACTACATTGCATTGAGGGTCTCAGATATCATGGCTGTCCTTTCCTAG 1134 0.4753 MRGSNIVITLGRHSLTTTGVHPLLTGRHRLVLPGVLSYTKNFSRSLWLLVQRTRRFVRCHRESSSVSSFSVLAGSLLLQSLWYFSPLFVFLVLVSTTLVQNFGSPSIFSGSGRSLFFHEVLKFWSMATAQLTACSISSRNVSSFEGLRPSAVQFPSVVRIGTLTQRSFRGLVVKAATVVAPKYTAIRPLGDRVLVKIKEAEEKTDGGILLPSTAQTKPQGGEVVAVGEEKSAGKSKIETRVQIGAQVVYSKYAGTEVEFNGAKHLILKDDDIVGILETDEIKDLKPMNDRVLIQVAQAEDKTAGGLLLTEATKEKPSIGTVIAVGPGPLDEEGNRKPLSVNPGNTVLYSKYAGNDFKGKDGSDYIALRVSDIMAVLS 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g02289 377 ProSitePatterns Chaperonins cpn10 signature. 186 210 IPR018369 GO:0005524|GO:0006457
Adu03g02289 377 Pfam Chaperonin 10 Kd subunit 284 375 IPR020818 GO:0005524|GO:0006457|GO:0140662
Adu03g02289 377 Pfam Chaperonin 10 Kd subunit 186 275 IPR020818 GO:0005524|GO:0006457|GO:0140662
Adu03g02289 377 SUPERFAMILY GroES-like 184 277 IPR011032 -
Adu03g02289 377 CDD cpn10 284 376 IPR020818 GO:0005524|GO:0006457|GO:0140662
Adu03g02289 377 PANTHER 10 KDA HEAT SHOCK PROTEIN 126 377 IPR020818 GO:0005524|GO:0006457|GO:0140662
Adu03g02289 377 CDD cpn10 186 276 IPR020818 GO:0005524|GO:0006457|GO:0140662
Adu03g02289 377 Hamap Co-chaperonin GroES [groES]. 185 277 IPR020818 GO:0005524|GO:0006457|GO:0140662
Adu03g02289 377 Gene3D GroES chaperonin 179 278 IPR037124 GO:0006457
Adu03g02289 377 Gene3D GroES chaperonin 279 377 IPR037124 GO:0006457
Adu03g02289 377 PRINTS 10kDa chaperonin signature 341 353 IPR020818 GO:0005524|GO:0006457|GO:0140662
Adu03g02289 377 PRINTS 10kDa chaperonin signature 306 327 IPR020818 GO:0005524|GO:0006457|GO:0140662
Adu03g02289 377 PRINTS 10kDa chaperonin signature 363 376 IPR020818 GO:0005524|GO:0006457|GO:0140662
Adu03g02289 377 PRINTS 10kDa chaperonin signature 186 201 IPR020818 GO:0005524|GO:0006457|GO:0140662
Adu03g02289 377 Hamap Co-chaperonin GroES [groES]. 283 377 IPR020818 GO:0005524|GO:0006457|GO:0140662
Adu03g02289 377 SMART Cpn10_2 185 276 IPR020818 GO:0005524|GO:0006457|GO:0140662
Adu03g02289 377 SMART Cpn10_2 283 376 IPR020818 GO:0005524|GO:0006457|GO:0140662
Adu03g02289 377 PANTHER GROES CHAPERONIN 126 377 - -
Adu03g02289 377 SUPERFAMILY GroES-like 283 376 IPR011032 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g02289 Adu-Chr3 50363325 50366013 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g02289 126 377 Calmodulin-binding Proteins AT5G20720 74.409 2.71e-131 374
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g02289 K04078 - gmx:100814751 411.379
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu03g02289 03 50363325 50366013 Adu03g02289 03 50363325 50366013 ECH