Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g02286 ATGGTGAAGCAGAACAATAACGTGGAGAAGCTTGCGTCAATGGAGCGGAGTGATCTGAAGTATAAAGGTGTAAGGAAGCGAAAGTGGGGGAAGTATGTTTCAGAAATAAGGCTACCAAATAGCCGCCAGAGGATTTGGTTGGGATCCTACGATACCGCCGAGAAGGCGGCGCGTGCATTTGACGCGGCCATGTTTTGCTTACGTGGCGCCGCCGCCAAGTTCAATTTCCCCGGTGCTCCGCCGGAGATCGCCGGCGGAAGGTACATGACCCCTCCCCAAATTCAGGCCGCTGCCGCCCGGTATGCCAATTCGGACCCGGTTCGACCCTGTTCCACCTCGACTGAAACTTCCACGATGTTGTCGGAGGAGACTAAAACGGTGATGCCGACATCGGCATCACCATCACCGTCACCGTCCGATGTGACTCTTCAAACGGAATGTGACGTCACAGCCATGAACGGGTCGGGCTCGGATCTTTTTACAACAATAGGGTCGGTTAACCACGATTCTATATTTACGGGTTTTGATGATTTTGGTGGGGATTTCTACCTGCCAGAGATGCCGAGTTACGATTATGAAGAGGAGAATTTGGATGGTTTGATAATTGACGACACTTTCTTGTGGAGTTTCTGA 633 0.5166 MVKQNNNVEKLASMERSDLKYKGVRKRKWGKYVSEIRLPNSRQRIWLGSYDTAEKAARAFDAAMFCLRGAAAKFNFPGAPPEIAGGRYMTPPQIQAAAARYANSDPVRPCSTSTETSTMLSEETKTVMPTSASPSPSPSDVTLQTECDVTAMNGSGSDLFTTIGSVNHDSIFTGFDDFGGDFYLPEMPSYDYEEENLDGLIIDDTFLWSF 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g02286 210 PRINTS Ethylene responsive element binding protein signature 21 32 IPR001471 GO:0003700|GO:0006355
Adu03g02286 210 PRINTS Ethylene responsive element binding protein signature 43 59 IPR001471 GO:0003700|GO:0006355
Adu03g02286 210 ProSiteProfiles AP2/ERF domain profile. 20 77 IPR001471 GO:0003700|GO:0006355
Adu03g02286 210 CDD AP2 20 77 IPR001471 GO:0003700|GO:0006355
Adu03g02286 210 PANTHER TRANSCRIPTION FACTOR AP2-EREBP FAMILY-RELATED 5 210 - -
Adu03g02286 210 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 5 210 - -
Adu03g02286 210 SUPERFAMILY DNA-binding domain 20 77 IPR016177 GO:0003677
Adu03g02286 210 MobiDBLite consensus disorder prediction 101 141 - -
Adu03g02286 210 MobiDBLite consensus disorder prediction 106 141 - -
Adu03g02286 210 Pfam AP2 domain 20 69 IPR001471 GO:0003700|GO:0006355
Adu03g02286 210 SMART rav1_2 20 83 IPR001471 GO:0003700|GO:0006355
Adu03g02286 210 Gene3D AP2/ERF domain 20 78 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g02286 Adu-Chr3 50154064 50155130 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g02286 1 210 AP2-EREBP Transcription Factor Family AT1G74930 45.581 6.79e-48 154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Adu03g02286 AP2 1e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g02286 - - gmx:732656 228.024