Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g02284 ATGTCTAGTTCGTCGGAATACTCGGAATTTTCCGGCCAGAAGCCGGCGAGGTCACCGGAAAAATCGAGCTTCTCTCAGACTTGCAGTTTGTTGAGTCAATACATCAAAGAAAAGGGCAACTTTGGAGATCTTACCCTCGGTATCACATGCAACACCGAACCAAGTGGGTCACCTGAAACATCGTGTCAGTCTGCAACAACTATGAACCTATTTCCTACCAAAGAAAACAACGTTGCACCAAAAAGCCTCACACTCACTGGCACAGCCATGGGTTTGCTCTCTCCACAAGGTGCTTATCGTGCCAATCTTCCCTCTGAAGAAATTCCAAACTTGATCAATTCCAGTGCAGTTAAGTCTGTGAGCAAGGGCCTGAAAACTGCACAATTGACAATCTTCTATAATGGTCAAGTTGTTGTGCTCGATGATTGTCCTGCTGAGAAGGCGAACGAGCTCATGGCTTTTGCCAAGAAAGGAGTCTCTCAAACCCAGAACAACTCTGTCTACACCTACACTCAGAGCCAGCCTTCATTTCCTCCTAATTTGGCCAGAACATCTGCTGCTGATTCGAGTGCTCAAGCCTTTCCTAACGTGAATATTGTTGCAAGTTCCGGTAGCAGTTCGATCCACGAGCACTCAAAACCTCAGTCCAGACCTGTTGTTTGTGGTAATTATTCTTTTGGATCTACTATTTGTAACTTGGCTGAAAAGAAAACCTTTTGTGTTGTTGTGGATCAAGTTTTTGCTGATCATAAATTTTCCTTTCGATGCAGATCTACCAATTGCAAGAAAAGCTTCGCTTCATCGGTTCCTGGAGAAGAGAAAGGATAG 828 0.4457 MSSSSEYSEFSGQKPARSPEKSSFSQTCSLLSQYIKEKGNFGDLTLGITCNTEPSGSPETSCQSATTMNLFPTKENNVAPKSLTLTGTAMGLLSPQGAYRANLPSEEIPNLINSSAVKSVSKGLKTAQLTIFYNGQVVVLDDCPAEKANELMAFAKKGVSQTQNNSVYTYTQSQPSFPPNLARTSAADSSAQAFPNVNIVASSGSSSIHEHSKPQSRPVVCGNYSFGSTICNLAEKKTFCVVVDQVFADHKFSFRCRSTNCKKSFASSVPGEEKG 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g02284 275 PANTHER BNAA02G17040D PROTEIN 1 194 - -
Adu03g02284 275 MobiDBLite consensus disorder prediction 1 23 - -
Adu03g02284 275 Pfam tify domain 126 155 IPR010399 -
Adu03g02284 275 SMART tify_2 122 157 IPR010399 -
Adu03g02284 275 ProSiteProfiles Tify domain profile. 122 157 IPR010399 -
Adu03g02284 275 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 1 194 IPR040390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g02284 Adu-Chr3 50037854 50040671 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g02284 1 160 Tify Gene Family AT1G19180 42.857 1.63e-28 107
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Adu03g02284 tify 2.2e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g02284 K13464 - gmx:100812618 282.722
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu03g02284 03 50037854 50040671 Adu03g02284 03 50037854 50040671 ECH
Adu01g01981 01 86824824 86826185 Adu03g02284 03 50037854 50040671 PCT