Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g02266 ATGCAGAGGAAAGCAGCATTGCCGTTGAGGGACGCAAAAAGCGGCAATGCGAACAAGATGAAGGCTTTGTGCGGCAAGGAAGCTTTGGTGAAGCTTCTGCGATGGCATTTTGGGTACCCTGATTTCAGGGGCAAGCAATTGGACGCTATTCAAGCTGTTCTCTCAGGAAGAGATTGTTTTTGTCTTATGCCTACTGGAGGAGGCAAGTCGATGTGTTATCAGATTCCTGCATTGGCCAAAACAGGAATTGTGCTTGTTGTTTGTCCTTTAATAGGCTTTTGCTCATTTGTTCTTTCTGCATGTCAGGAAAACCAAGTAATGGCATTAAAAGAGAAAGGTATTTGTGCTGAATTTCTCTCCTCAACAATATCAACTGAGGCAAAAAATAAGATTCATGACGATCTTGATTCTGGAAAACCCTCTACAAGGCTGCTATATGTGACTCCAGAGTTGATAGCAACAGCGGGGTTTATGCCAAAGCTGAAAAAGATTTACGCTAGGGGGCTGCTAAGTCTCATTGCCATAGATGAGGCACATTGCATCTCAAGTTGGGGCCATGATTTCAGACCAAGTTACCGTCAACTTTCATTGTTGAGAAGCCACCTACCAGATGTTCCAATATTAGCTCTAACTGCTACTGCTGCTCCTAAGGTTCAGAAGGATGTTGTACAGTCTTTGCATTTGCAAAATCCATTAATTCTTAAATCTTCTTTTAACCGTCCTAATATCTATTATGAAGTTCGATATAAAGATCTTCTGGATGATGCTTATGCCGATTTATCTAATACATTAAAATCTAAGGGAGATGTTTGTGCAATAGTTTACTGTCTTGAACGTTCAATGTGTGATGAATTGTCAGCTCATCTATCCCAAAATGGCATTTCCTGTGCTGGTAACTCTCTTTCTATGTGTGCATGTGTGTGTATATTGCTGCCCTTCAAATTGTATTCATGTTCTTTGCTGTTTGTTTCAGCTTATCATGCAGGATTGAATAAGAAAATGCGAACGTCTGTGTTAGATGAGTGGATTTCTTCCAAAATACAAGTTGTTGTTGCCACTGTTGCTTTCGGGTATGGGATTGATAGAAAGGATGTAAGAATTGTATGCCACTTCAATATTCCCAAGTCAATGGAAGGATTTTATCAAGAGTCAGGCAGAGCAGGTCGTGATCAACTGCCCTGTACAAGTCTGCTGTACTACGGGGTAGATGATCGCAAAAGAATGGAATTCATATTAAGAAATTCAGGAAGCAAGAAATCCCAATCATCTACTTCACAGGAAGAATCATCAAAAAAGTCAATGGCTGACTTTACCCAGATGGTTGAATATTGTGAAGGATCTGGATGTCGTAGGAAAAGGATTCTCGAGAGTTTTGGGGAGAAGGTTACTGCATCCCTGTGTGAAAAAACATGTGATGCTTGCAGACATCCAAACTTAGTTGCCCGAAATTTGGAGGATCTGACAACTGCCATTGCTCTGCGCCAGAAAGGCGGTTCTTCTCGAATTTTCATCACCAGTTCTTCTGATGCAATCAACGGAGAACAGTTATCTGAATTCTGGAATCGTGGTGATGAAGCAATTGGCTCAGATGATGATATATCTGACTCCGATGATGGTAATGAGGTTGTCAACAACCTAACCAAGTCAAAGCTTCATTCTAGAGTGGGAGTAAATGAAAAGCTTGCTATGTTAGAACGTGCAGAAGAAAACTTCTATCGAAATGAGAAAGCTAAGAAACAGAGTAAAGTTGACAAGAATGCTATTTCTGATGCAATGCGAGAATCAAGCAGGCAAAGATTACAAAATGCTCTGAAACAGGCTCAGCAGCGACTTGACAACTTAAAGATTGAGTTGGAGACATCAGCATCTTTCCTTGAAGATGAATGCTACAAGAAATATAGCAAAACTGGCAAATCATTCTATTATTCACAAGTGGCGAGCACGGTTAGGTGGCTGGCAACGACAAGTTCTGTTGATATGTTGAACCGACTTGGCACAATGAAGGAATCTACATCAATGGATGCTGTTCCTGAAGCTGAAGGTCGCACCCCACCACATGCTATAGATCATTCTGGAAAGGAAGGTACAAGTAATGAACTCTCGGGCAATGCTCAGTCAGAAATTTTGCCTTGCGGTGACAGGGGCATGCCAGTAGAAAGTTCTTCCGTTAATACAAAGCTGCCACAGATTCCGTCGTTCTATGAATTTGTTAATAGTAGGAAAACAAAAGGTGACCAATTAGATGACACAAAAAAGAACTCATCTAGAGTAGAAAAGAAAATGAGAGTACAGTAG 2295 0.41 MQRKAALPLRDAKSGNANKMKALCGKEALVKLLRWHFGYPDFRGKQLDAIQAVLSGRDCFCLMPTGGGKSMCYQIPALAKTGIVLVVCPLIGFCSFVLSACQENQVMALKEKGICAEFLSSTISTEAKNKIHDDLDSGKPSTRLLYVTPELIATAGFMPKLKKIYARGLLSLIAIDEAHCISSWGHDFRPSYRQLSLLRSHLPDVPILALTATAAPKVQKDVVQSLHLQNPLILKSSFNRPNIYYEVRYKDLLDDAYADLSNTLKSKGDVCAIVYCLERSMCDELSAHLSQNGISCAGNSLSMCACVCILLPFKLYSCSLLFVSAYHAGLNKKMRTSVLDEWISSKIQVVVATVAFGYGIDRKDVRIVCHFNIPKSMEGFYQESGRAGRDQLPCTSLLYYGVDDRKRMEFILRNSGSKKSQSSTSQEESSKKSMADFTQMVEYCEGSGCRRKRILESFGEKVTASLCEKTCDACRHPNLVARNLEDLTTAIALRQKGGSSRIFITSSSDAINGEQLSEFWNRGDEAIGSDDDISDSDDGNEVVNNLTKSKLHSRVGVNEKLAMLERAEENFYRNEKAKKQSKVDKNAISDAMRESSRQRLQNALKQAQQRLDNLKIELETSASFLEDECYKKYSKTGKSFYYSQVASTVRWLATTSSVDMLNRLGTMKESTSMDAVPEAEGRTPPHAIDHSGKEGTSNELSGNAQSEILPCGDRGMPVESSSVNTKLPQIPSFYEFVNSRKTKGDQLDDTKKNSSRVEKKMRVQ 764
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g02266 764 MobiDBLite consensus disorder prediction 670 705 - -
Adu03g02266 764 TIGRFAM recQ_fam: ATP-dependent DNA helicase, RecQ family 32 297 IPR004589 GO:0004386|GO:0006310
Adu03g02266 764 PANTHER DNA HELICASE RECQ FAMILY MEMBER 319 748 - -
Adu03g02266 764 CDD SF2_C_RecQ 240 400 - -
Adu03g02266 764 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 50 232 IPR014001 -
Adu03g02266 764 Coils Coil 597 617 - -
Adu03g02266 764 Pfam Helicase conserved C-terminal domain 322 389 IPR001650 -
Adu03g02266 764 PANTHER ATP-DEPENDENT DNA HELICASE Q-LIKE 3 6 297 - -
Adu03g02266 764 MobiDBLite consensus disorder prediction 414 433 - -
Adu03g02266 764 SMART helicmild6 313 391 IPR001650 -
Adu03g02266 764 MobiDBLite consensus disorder prediction 741 764 - -
Adu03g02266 764 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 252 431 IPR001650 -
Adu03g02266 764 MobiDBLite consensus disorder prediction 738 764 - -
Adu03g02266 764 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 83 412 IPR027417 -
Adu03g02266 764 SMART ultradead3 38 248 IPR014001 -
Adu03g02266 764 CDD DEXHc_RecQ 31 239 - -
Adu03g02266 764 Gene3D - 8 239 IPR027417 -
Adu03g02266 764 PANTHER DNA HELICASE RECQ FAMILY MEMBER 6 297 - -
Adu03g02266 764 Pfam RecQ zinc-binding 404 475 IPR032284 -
Adu03g02266 764 Gene3D - 240 493 IPR027417 -
Adu03g02266 764 Pfam DEAD/DEAH box helicase 46 220 IPR011545 GO:0003676|GO:0005524
Adu03g02266 764 PANTHER ATP-DEPENDENT DNA HELICASE Q-LIKE 3 319 748 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g02266 Adu-Chr3 48631285 48638738 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g02266 35 414 Eukaryotic Initiation Factors Gene Family AT3G19760 21.970 4.30e-10 60.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g02266 - K10901 gmx:100819601 1082.01
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu03g02266 03 48631285 48638738 Adu03g02266 03 48631285 48638738 ECH