Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g02260 ATGGCCCCGCAGTCCCGCGTGGCGGCCTACAAGGTTTGTTGGACCGACGGCTGTTTCGCCTCCGACATTCTCGCCGGAATAGATCGTGCAATTGAAGACGGCGTGGACGTGCTCTCGCTCTCCCTCGGTGGCGGCTCCGCCCCTTACTTCCGTGACACAATCGCGATAGGCGCGTTTGCGGCGGTTGAGAAAGGGATCTTCGTCGCATGCTCCGCGGGGAACAGTGGACCCAGTAAGAGCACACTTGCCAACGTGGCACCGTGGATTATGACCGTTGGGGCAGGTACACTTGACCGTGACTTCCCGGCTTTTGCGGTTCTTGGTAACAAGAAGTTTTCTGGGGTTTCGCTTTATAGTGGGAAAGGGATGGGAACTGAACCGGTCAGTTTGGTTTATTTTAAGAATTCGAACCAGTCTAGTAGCATTTGTCTGCCCGGTTCGCTTGACCCGGATTTGGTGAAGGGAAAAGTGGTTCTTTGCGATAGGGGGATGAATGCGAGGGTTGAGAAGGGACAGGTTGTGAGGGACGCCGGTGGTGTCGGGATGATTCTTGCAAACACGGCGGAGAGTGGGGAGGAGTTGGTGGCCGATAGTCATTTGTTGCCGGCGGTGGCAGTTGGGAGGATTGTTGGGGACCAGATCAGGGAGTATGTCGGGTCGGATCCGAAGGCGACAGCAGTTTTGAGCTTCGGTGGGACGGTTTTGAACGTTAGGCCGTCGCCTGTTGTGGCTGCTTTCAGTTCGAGAGGGCCCAATACCGTGACGAGGCAGATACTAAAACCTGATGTTATTGGGCCTGGTGTCAATATTCTCGCTGCTTGGTCAGAAGCTATTGGGCCCTCTGGGCTGGCTCAGGACACTCGCAAGACTAAGTTCAACATCATGTCAGGTACTTCAATGTCATGTCCGCACATAAGTGGGTTGGCTGCGTTGCTGAAAGCAGCTCACCCAGAATGGAGTCCCAGTGCAATCAAATCGGCACTCATGACGACAGCCTACACCCGCGACAACACCCGGTCGCTACTCCATGATGCCGCCGAAGGCTCGTTCTCCAACCCATGGGCTCACGGTTCAGGCCACGTCAACCCACAGAAGGCTCTCTCCCCTGGGCTTGTCTATGATGCCTCCACAAGTGACTACGTTAAATTCTTGTGCTCCTTGGGCTATAGCCCAGAACAATTGCAAATCTTAATCAAGCACTCCGGTTTCAATTGCACCAAGAAGTTCTCTGACCCTGGCCAATTGAATTACCCTTCATTCTCGGTCATGTTTGGTGGCAAGAGGGTTGTCCGGTACACACGGAGGCTGACCAATGTTGGCGAGGCCGATTCGGTTTACAATGTGACCGTGAATGTCCCGCCGGCTGTGAGTGTAACAGTGAAGCCCACCAGGCTTGTGTTTGGAAAAGTAGGTGAGAGTAAAACGTACACTGTCACGTTTGTTTCCAAGAAGGGTACAAAAAATAAAGCTAGGTATGGGTTTGGTAGCATTGTGTGGAGCAATGCCTATCACCAAGTTAAAAGCCCAGTAGCTTTTGCTTGGACAGCGTTGTGA 1554 0.5335 MAPQSRVAAYKVCWTDGCFASDILAGIDRAIEDGVDVLSLSLGGGSAPYFRDTIAIGAFAAVEKGIFVACSAGNSGPSKSTLANVAPWIMTVGAGTLDRDFPAFAVLGNKKFSGVSLYSGKGMGTEPVSLVYFKNSNQSSSICLPGSLDPDLVKGKVVLCDRGMNARVEKGQVVRDAGGVGMILANTAESGEELVADSHLLPAVAVGRIVGDQIREYVGSDPKATAVLSFGGTVLNVRPSPVVAAFSSRGPNTVTRQILKPDVIGPGVNILAAWSEAIGPSGLAQDTRKTKFNIMSGTSMSCPHISGLAALLKAAHPEWSPSAIKSALMTTAYTRDNTRSLLHDAAEGSFSNPWAHGSGHVNPQKALSPGLVYDASTSDYVKFLCSLGYSPEQLQILIKHSGFNCTKKFSDPGQLNYPSFSVMFGGKRVVRYTRRLTNVGEADSVYNVTVNVPPAVSVTVKPTRLVFGKVGESKTYTVTFVSKKGTKNKARYGFGSIVWSNAYHQVKSPVAFAWTAL 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g02260 517 Gene3D Peptidase S8/S53 domain 190 383 IPR036852 GO:0004252|GO:0006508
Adu03g02260 517 Gene3D Peptidase S8/S53 domain 1 153 IPR036852 GO:0004252|GO:0006508
Adu03g02260 517 SUPERFAMILY Subtilisin-like 1 371 IPR036852 GO:0004252|GO:0006508
Adu03g02260 517 Gene3D - 384 514 - -
Adu03g02260 517 Pfam Subtilase family 1 335 IPR000209 GO:0006508|GO:0008236
Adu03g02260 517 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 1 514 IPR045051 -
Adu03g02260 517 Pfam PA domain 131 214 IPR003137 -
Adu03g02260 517 SUPERFAMILY PA domain 153 221 IPR046450 -
Adu03g02260 517 ProSiteProfiles Serine proteases, subtilase domain profile. 1 367 - -
Adu03g02260 517 CDD PA_subtilisin_like 106 226 - -
Adu03g02260 517 PANTHER CUCUMISIN-RELATED 1 514 - -
Adu03g02260 517 ProSitePatterns Serine proteases, subtilase family, serine active site. 297 307 IPR023828 -
Adu03g02260 517 Pfam Fibronectin type-III domain 414 511 IPR041469 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g02260 Adu-Chr3 48206973 48208928 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g02260 1 514 Subtilisin-like Serine Gene Family AT2G05920 73.398 0.0 795
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g02260 - - gmx:100797543 852.818
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu01g01992 01 86884825 86887846 Adu03g02260 03 48206973 48208928 PCT