Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g02256 ATGACATTCATGAAAGGAATATGGAAATCAATGTTGCCGGGATGTTACAAAGGAGAGTACCCATCAAGAAAGCCGAAGAGAGTGGTTTCGACGAAGCCAATATGTTCGCAGAGGATATCAGTGAGTGACTTGAGCTTCCCAAGCACAACATTCTCGGAGGATCTGTCGATGTCGCTGGCGGGAACAAACCTGCATGTCTTCACGCTGGCTGAGCTCAAGCTCATCACTCAGCATTTCTCGTCCAGTAACTTCCTTGGCGAAGGCGGGTTCGGACCGGTTCACAAGGGCTTCATTGATGATAAGCTTAGGCATGGCCTTAAGCCTCAGCCTGTTGCTGTTAAGCTCTTGGACTTGGATGGCTCCCAAGGCCATAAAGAGTGGTTGACTGAAGTGGTTTTCCTGGGTCAACTAAGGCATCCACACCTTGTGAAGCTGATTGGATATTGCTGTGAAGAAGATCATAGGCTTTTGGTATATGAATACTTACCAAGAGGCAGCTTAGAAAATCAACTATTTAGAAGATTCTCAGCATCATTGCCCTGGTCAACAAGAATGAAAATTGCTGTTGGAGCTGCAAAGGGTTTAACCTTTCTCCATGAGGCAGAGAAGCAAGTCATCTATAGAGATTTCAAAGCTTCAAACATATTGTTAGACTCTGATTACAATGCAAAACTATCTGATTTTGGGTTAGCAAAGGATGGTCCTGAAGGAGATGACACCCACGTTTCAACTCGTGTTATGGGAACCCAAGGCTATGCTGCCCCGGAATATGTCATGACAGGTCACTTGACAGCAATGAGTGACGTGTACAGCTTTGGGGTAGTATTGTTAGAGCTTCTAACAGGAAGAAGATCAGTGGACAAGAGTAAGGTACCAAGGGAACAAAACCTTGTGGAATGGGCAAGGCCAATGCTCAATGACCCAAGAAAACTCGGAAGGATAATGGACCCTAAACTTGAAGGGCAGTACTCTGAAATGGGATCAAGAAAGGCTGCAGCATTGGCCTACCAATGCCTTAGCCATAGGCCCAGGAACAGGCCCACTATGAGTGCTGTTGTTAAGGTTCTTGATCCCCTTCAGGACTTTGATGATATTCCAATTGGGCCCTTTGTGTATACCGTTCCTAATGAAAGTAATAATAATAATAATAATAGTGGTGTTGAATCTTCTTTTTCTCCTTCTCCTTCTCCTAACAAGGAGAAGAAAAGTGGACATCATCATCATCATCGTCATAGGCGACCACATCCGCTTGCTAAATCACCTAAGTCACCAAGGCCACATTCACATTTAAATTCAGAGAATGAGAGACACCACACGAATAGAAGATCATCATCAACACAAGCTACTTCTTCTCTCCGTGGCTGCTACTTCTGCTTCTTCCGCCGCTGCCGCTGCCGCTGCTGCCATTGCGTCACACAATCTCTCTCTGTCATCCCTTGCATCGCACGAGATCCCTCCGCCGCCGCTCTCGTCGCATCTACTCCCATCGTCGCAGAGCTCTCTCTGCCGCCGCTCTCATCGCATCTGCTCCCTCTGGCTCCTCTTCCATCTAATCTCAACTCGCTCTCTCAGTTCTTCTCGTAA 1584 0.4659 MTFMKGIWKSMLPGCYKGEYPSRKPKRVVSTKPICSQRISVSDLSFPSTTFSEDLSMSLAGTNLHVFTLAELKLITQHFSSSNFLGEGGFGPVHKGFIDDKLRHGLKPQPVAVKLLDLDGSQGHKEWLTEVVFLGQLRHPHLVKLIGYCCEEDHRLLVYEYLPRGSLENQLFRRFSASLPWSTRMKIAVGAAKGLTFLHEAEKQVIYRDFKASNILLDSDYNAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEYVMTGHLTAMSDVYSFGVVLLELLTGRRSVDKSKVPREQNLVEWARPMLNDPRKLGRIMDPKLEGQYSEMGSRKAAALAYQCLSHRPRNRPTMSAVVKVLDPLQDFDDIPIGPFVYTVPNESNNNNNNSGVESSFSPSPSPNKEKKSGHHHHHRHRRPHPLAKSPKSPRPHSHLNSENERHHTNRRSSSTQATSSLRGCYFCFFRRCRCRCCHCVTQSLSVIPCIARDPSAAALVASTPIVAELSLPPLSSHLLPLAPLPSNLNSLSQFFS 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g02256 527 MobiDBLite consensus disorder prediction 401 422 - -
Adu03g02256 527 SUPERFAMILY Protein kinase-like (PK-like) 64 383 IPR011009 -
Adu03g02256 527 PANTHER OS01G0588500 PROTEIN-RELATED 24 384 - -
Adu03g02256 527 MobiDBLite consensus disorder prediction 376 445 - -
Adu03g02256 527 ProSitePatterns Serine/Threonine protein kinases active-site signature. 205 217 IPR008271 GO:0004672|GO:0006468
Adu03g02256 527 Gene3D Phosphorylase Kinase; domain 1 41 161 - -
Adu03g02256 527 Gene3D Transferase(Phosphotransferase) domain 1 162 365 - -
Adu03g02256 527 MobiDBLite consensus disorder prediction 376 398 - -
Adu03g02256 527 ProSiteProfiles Protein kinase domain profile. 79 360 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu03g02256 527 PANTHER SERINE/THREONINE KINASE FAMILY PROTEIN 24 384 - -
Adu03g02256 527 Pfam Protein tyrosine and serine/threonine kinase 83 356 IPR001245 GO:0004672|GO:0006468
Adu03g02256 527 MobiDBLite consensus disorder prediction 426 442 - -
Adu03g02256 527 CDD STKc_IRAK 85 359 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g02256 Adu-Chr3 47887193 47891282 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g02256 65 356 Glycoside Hydrolase AT3G07070 53.220 2.73e-98 301
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Adu03g02256 PK_Tyr_Ser-Thr 7.6e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g02256 - - gmx:100797003 711.449
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu01g01993 01 86901561 86903711 Adu03g02256 03 47887193 47891282 PCT