Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g02238 ATGATGAACAGTAGCAGCAGCAGCAGCAGTAGTAGTAGAAACAGTAGGTTTCCTTTCACCCCATCACAATGGCAAGAACTTGAACACCAAGCTCTAATATATAAATACATGGCTTCAGGTACCACTGTCCCTCCTGATCTTCTCTTCACTCTCAAAAGAAGCCATTTCAATTTGCCTCATCACCAACCAGCAGCTCAACAACAACACTTTGGATGGAACTATCTTGAAATGGGTTTGGGAAGAAAAATAGACCCGGAACCAGGAAGGTGCAGAAGAACAGATGGAAAAAAATGGAGGTGCTCAAAAGAGGCATACCCAGATTCAAAGTACTGTGAGAGGCACATGCACCGAGGGAAAAACCGTTCAAGAAAGCCTGTGGAACTTTTGAAAACAACAACAAACGCATGCAATAGTGCTTCTTCAGCAACAACCCACACCATCATCTCATCACCATCATCAATCACTAAAACTAATCAGCACCCTCAACAACGTTCTTGCTATAATAATGGTTCCAATCTTCTTCATCAGCATTCCTTTGTCTTCAATTCCCACACTCCATCAAGGTCATCAACATCTGCTGTTGCTTTTTCATTTCAAGACAACACTGCTCCCTCCAGTAGGTATGTCTATGGAGTGAAAGAGGATGCGGATGAACGTGCTTTCTTCAAAGAACCTTCTAGCACATTGAAAAGCTTCTCTGGATCCTCCATTGACGATTCATGGCAACTCACACCATTGACCATAAGCACCTCATCTTCTTCTTCCTCCACAAAACAGAGGAGATGCACAAGTTTATCCAACAATATTGAGAGCCTCAATGAGCGCTCAAAAAATCAAGAACAAGATCAGAAGACTACTGTTCATAGCTTCTTTGATGAATGGCCCCACAAAGGCAGAGGATTTGATTCCGATGACAAATGTTCTTCCACAACCAAATTATCAATTTCCATTCCATCAACATCTTTTCATGACTTTCCCGTCCTTCAGTTCAAGAACCCACCTCACTGCTGA 1011 0.4243 MMNSSSSSSSSSRNSRFPFTPSQWQELEHQALIYKYMASGTTVPPDLLFTLKRSHFNLPHHQPAAQQQHFGWNYLEMGLGRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVELLKTTTNACNSASSATTHTIISSPSSITKTNQHPQQRSCYNNGSNLLHQHSFVFNSHTPSRSSTSAVAFSFQDNTAPSSRYVYGVKEDADERAFFKEPSSTLKSFSGSSIDDSWQLTPLTISTSSSSSSTKQRRCTSLSNNIESLNERSKNQEQDQKTTVHSFFDEWPHKGRGFDSDDKCSSTTKLSISIPSTSFHDFPVLQFKNPPHC 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g02238 336 Coils Coil 262 282 - -
Adu03g02238 336 PANTHER GROWTH-REGULATING FACTOR 6 14 320 - -
Adu03g02238 336 Pfam QLQ 18 50 IPR014978 GO:0005524|GO:0005634|GO:0006355
Adu03g02238 336 PANTHER - 14 320 IPR031137 GO:0005634|GO:0006351|GO:0032502
Adu03g02238 336 SMART QLQ_2 17 53 IPR014978 GO:0005524|GO:0005634|GO:0006355
Adu03g02238 336 Pfam WRC 85 127 IPR014977 -
Adu03g02238 336 ProSiteProfiles WRC domain profile. 84 128 IPR014977 -
Adu03g02238 336 ProSiteProfiles QLQ domain profile. 18 53 IPR014978 GO:0005524|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g02238 Adu-Chr3 46129297 46131652 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g02238 5 127 GRF Transcription Factor Family AT3G13960 62.016 2.81e-50 170
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Adu03g02238 WRC 6.8e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g02238 - - gmx:100814271 356.681
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu03g02238 03 46129297 46131652 Adu03g02238 03 46129297 46131652 ECH
Adu01g02006 01 87086155 87087673 Adu03g02238 03 46129297 46131652 PCT