Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g02230 ATGTATTGCTATGGTAATGGATTGTTTCAGGTGGAAGAGGACCCGATAGAAAATGAAACCTTTGTTGCAGAAACAGAATCCGTTCCGATTGGTGCTAGTCAGTCAGACGATCAAAGAGATGTCATCATTCTCGATGGAATAGGTTCGTTTGGTGCAATTGATTTTGATGCGTTGCGAGCTGAGGAGATTATGATGATAGAGTTTGTCGATTTGAAAACTGCTTACGACTTCTATAACGAGTACGGTCGAATTAAGGGGTTTTCCATATGGCGGTCGAAGGTAGGGCGCTGCAAGAAGGCAGGATCTGAGGGTGACATTATATGGCAAATTTTTGTATGCTCACGACAAGGTGAACGAGATGCAAAGCATGTTCACAGAAATGATAGGAAGATGGATCCTAGACCAGTAACGCGATGCGGTTGTAATGCGCGGATAAAAGTTCATGTTGACTTGAGAAATGGGAGATGGTACGTTGACTTTTTCTCCGATGAACATAACCATGACATGTTGGAGGCAAGGTTTAGGGGAATGATGCGGTCTCACCGGGCAATAAAAATGAGGGATTTACACCAGATTAATACTTTGAGAAGCTCTGGCCTTCGAGTTCCGACAATATTTCAGGCTTTTGCAAACCAAAGTGGTGGATTCGAGATGGTTGGGTTTCAGGTGAAAGACATCTATAATGTAATTGAGAAGCAAAGAAGAGCTGGAGCAAGCGACACGGATAATGCACTCAAGTATTTACAAATGTTGAAGAGGCGTGACCCCTGTATGTTTTGGAAGTATTCGTTGGATGAACAACGGAGGCTCCACAATATATTTTGGTGTGATGGCGCAAGTCAGTATGATTTCAATGTTTTCGGAGATGTTACGGGGTTTGATGCAACGTATGGGAGGAATAAGTACAAATGTCCCTTTGTGATATTCTCTAGCGTGGATCACCACATGCGCAATGTTGTGTTTGGATGCGCGGTTCTCTCAAAGGAAGGGGAGGAAAGCTATGTGTGGTTGCTTCGGGTATTTCTGGAGGCCATGAAAGGAAAGGCTCTTAAGTCCGTTATTAACGACGGTGATCAAGCCATGAAAAGTGCAATCAAAGTTGTATTTCCAGAAGCACATCATAGATTGTACAGCTGGCACTTGCTACGCAATGCGACCGCTCGAGTAGGTATTCCACGGTTTATGACCAAGTTTCGTCTTTGTTTAATGGGGGATTTGGAGGTCGATGACTTTGAAGATATATGGAATGATGCAATTGAAGAATTTGGGTTGCAACAAAATTCATGGGTCAAGGATATGTATGAAAAGAAACATATGTGGTCAAATTCCCACATTAGGGGTAAGTTCTTTGCTGGGCTCAAGACAACATCAAGGTGTGAGGCGCTAAATATGCAGATAGGGAAGTTTATACACAACGGCTACAACTTGAGGGAATTTATTAAGCATTTCCAACAGTATTTAGAGTTCATGCGTAGAAGAGTAGTGGTTGCTGATTACAAATCTGCTTATGGAGAACCGGTTGTGAAAACAAGATTGGAGGAGTTAGAGCGGTTTGCAGCAGCAGTATACACACGAGAGATCATGGAACGTTTCGTGGGGGGAGATAGATGA 1611 0.4302 MYCYGNGLFQVEEDPIENETFVAETESVPIGASQSDDQRDVIILDGIGSFGAIDFDALRAEEIMMIEFVDLKTAYDFYNEYGRIKGFSIWRSKVGRCKKAGSEGDIIWQIFVCSRQGERDAKHVHRNDRKMDPRPVTRCGCNARIKVHVDLRNGRWYVDFFSDEHNHDMLEARFRGMMRSHRAIKMRDLHQINTLRSSGLRVPTIFQAFANQSGGFEMVGFQVKDIYNVIEKQRRAGASDTDNALKYLQMLKRRDPCMFWKYSLDEQRRLHNIFWCDGASQYDFNVFGDVTGFDATYGRNKYKCPFVIFSSVDHHMRNVVFGCAVLSKEGEESYVWLLRVFLEAMKGKALKSVINDGDQAMKSAIKVVFPEAHHRLYSWHLLRNATARVGIPRFMTKFRLCLMGDLEVDDFEDIWNDAIEEFGLQQNSWVKDMYEKKHMWSNSHIRGKFFAGLKTTSRCEALNMQIGKFIHNGYNLREFIKHFQQYLEFMRRRVVVADYKSAYGEPVVKTRLEELERFAAAVYTREIMERFVGGDR 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g02230 536 Pfam FAR1 DNA-binding domain 76 170 IPR004330 -
Adu03g02230 536 PANTHER OS02G0262500 PROTEIN 62 529 - -
Adu03g02230 536 Pfam MULE transposase domain 290 384 IPR018289 -
Adu03g02230 536 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 62 529 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g02230 Adu-Chr3 45532495 45534218 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Adu03g02230 FAR1 1.7e-19 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g02230 - - adu:107488338 998.423