Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g02228 ATGAGAATAGGGTTGGGCAAAGAAACTAGACGCCGTCCTCCTCATGCTCCTTTTCCTACCCTTTCGCTTCATACACCTTCGCCAATTTCGCTCCCGGAGCCTCCCCCTCATCCCCACGTGCTTCTCCTCCTCCTTTGGCCACTATCGGCGTCTTTCTTCCACCTCTTCGCCACTGTGTCCAACATCATCATCCGTGAGATTCTCCTCGGAGCAACCACCAGGCTCTCCCGGGCAACACTCTACGGCTATAAAGAGGCCCATGGTCTTGCTGTTGAAATACCTGCAGATCTATATCACTTGATCAAGAAGGATGTCTCCATCAGGAAGCACTTGGAGAGTAATAGGAAGGACAAGGACTCCAAATTCAGGTTGATTTTGGTAGAGAGTAGGATCCACCGCCTTGCACGTTACTACAAAAAGACCAAGAAGCTTCTACCTGTATGGAAATA 449 0.4989 MRIGLGKETRRRPPHAPFPTLSLHTPSPISLPEPPPHPHVLLLLLWPLSASFFHLFATVSNIIIREILLGATTRLSRATLYGYKEAHGLAVEIPADLYHLIKKDVSIRKHLESNRKDKDSKFRLILVESRIHRLARYYKKTKKLLPVWK 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g02228 149 Pfam Ribosomal protein S15 92 143 IPR000589 GO:0003735|GO:0005840|GO:0006412
Adu03g02228 149 SMART Ribosomal_S15_2 76 145 IPR000589 GO:0003735|GO:0005840|GO:0006412
Adu03g02228 149 MobiDBLite consensus disorder prediction 1 21 - -
Adu03g02228 149 PANTHER RIBOSOMAL PROTEIN S15P/S13E 84 149 IPR023029 -
Adu03g02228 149 PANTHER 40S RIBOSOMAL PROTEIN S13 84 149 - -
Adu03g02228 149 Gene3D - 92 149 - -
Adu03g02228 149 CDD Ribosomal_S15p_S13e 92 149 IPR000589 GO:0003735|GO:0005840|GO:0006412
Adu03g02228 149 ProSitePatterns Ribosomal protein S15 signature. 107 137 IPR000589 GO:0003735|GO:0005840|GO:0006412
Adu03g02228 149 SUPERFAMILY S15/NS1 RNA-binding domain 85 148 IPR009068 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g02228 Adu-Chr3 45466638 45470183 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g02228 85 149 Cytoplasmic Ribosomal Protein Gene Family AT4G00100 89.231 2.37e-34 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g02228 K02953 - tcc:18606355 120.553