Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g02217 ATGGAGAACGGAGAGGAAAAAGGCGTGGCGGCACATAGAACAGTAGGGACAAAGAACGAGGTTGTTCTTCGAATTCCCGAGAGCGAAAACATCATTTCCTATTCTCCTCAGCAGAAGGGTTCACCCTCAAAAGCCTTCGTAGATTCTTCAAATGTTGAACTAGCAGCTGAACTTCAGAGTCTAAAAAACAGTAGTACTGTTCAATCTCCAACTGCTACCACTTCAACCCGCTCTGTTGGTCGTTCCGAATTCTCGAAGCCAAAATCTAGATTGGTGGAACCGCCACATCCAATAGCTGCAAGCTTTCTTGAAGACAAAACCCAAATCAAGAGCTTCAAATCACCCGCAAGGACTTCCACCAGCAAAAAGACTACTCCTAATGCCACACCTCCAAGGGATGTTCCTATTACCCCAAGAACCCCTTTGATTGGGACTCCAATGGAAGAAGAAGAAGAGGAGGAGGAGGAGTTTTACAAGACCACAAACGTTGAAGTGAGCAAGAAGAGATCTGGCAAGAGGTGGAAGTTCCTGTGTATGATTGAATGGGTTGGTTTTGTTTCCATAGTTGGGTTCTTGATTGTATCCTTAGCAATCAAAAGGTTGCGAAATTCCGAAATATGGGGCTTGGAGCTGTGGAAATGGTGTGTTCTTGCACTGGTTATCCTCTGTGGGAGACTTGTCACTGGGTGGTTTATAAATGTTATGGTTTTCTTGATTGAAAGGAATTTCTTGTTCAAGAAGAAGGTTCTGTATTTTGTTTATGGTGTGAAGAAGAGTGTTCAAGCATTTTTATGGTTGGGCATTGTTCTTATGGCATGGGGTTTGATTTTCAATCATGGGATTAAGAGATCAAGAAGAGTTAATAGGGTTCTTGATTACATTACAAGATCTCTTGCATCTTGTCTTATTGGGGCAGCTCTATGGTTGGCAAAAATGTTGCTGATTAAGCTACTAGCTTCGCATTTCCAATCGGCTAGGTTTTTCAACCGGATTCAAGAGTCAATTTTTCATCAATACATTCTTCGGACCCTTTCAGGGCCTCCCTTGATGGAAATTGCGGAAAATGTGGGAAAGAATTCAAGTAGCAGCCGGTTGAGTTTTAAGACTTTGGTTAGGGAGAATGGGAATGAAGAGAAGAAAGAAGAGGTCATTGATGTGGAGAAGCTCAAGAAAATGAAACAAGAGAAAGTTTCTGCTTTGACTATGAAAGGATTGATCAGTGTGATAAAGAGTTCTGGATTGACCACGATTCTGCCGCAGAGTGTTGATGAAGATGAGAATGAGCAGATAGATAGCGAGATTACTAGTGAGTTGGAAGCAAAGGAGGCAGCATATCGAATTTTCAGCAATGTAGCCAAGCCAGGAAGCAAGTACATTCAGAAGGAAGACCTATTGCGCTTCATGACCAATGAAGAAGTTGAAAACCTGCTTCCGTTATTTGAAGGAGCAGTTGCAACTGGAAGAATCAAGAGGAAGTCTCTCAAGAATTGGCTGGTGAAAGTCTACCAAGAGCGTCAATCCCTTGTGCATTCGCTAAATGATACAAAAACAGCTGTCGATGATTTGAACTTGCTTGCTTCCGTGCTCATCATTATTGTGATCATCATTGTTTGGTTGCTTATAATGGGGTTCCTCACAACCCATGTTCTTCTCTTTATTACATCTCAGCTTTTACTCGCGGTGTTTATATTTGGTAACTCAGCTAAGACTGTCTTTGAAGCTATTATATTTGTTTTCGTGAGGCATCCGTTTGATGTTGGCGATCGTTGTGTCATCGATGGTGTTCAGATGACTGTTGAGGAGATGAACATACTAACTACAATCTTCTTGAGATTTGACAATGAAAAGATTTCATATCCAAATTCAGTTCTAGCAAACAAGCCTATCAGTAACTTCTACAGGAGTCCAGAAATGAGCGAATCAATCGAATTTTCTGTCGATATGTCGACACCAATCGAGAGTATCGCAGCTCTGAAGTCAAGAATAAAATCGTAA 1995 0.4155 MENGEEKGVAAHRTVGTKNEVVLRIPESENIISYSPQQKGSPSKAFVDSSNVELAAELQSLKNSSTVQSPTATTSTRSVGRSEFSKPKSRLVEPPHPIAASFLEDKTQIKSFKSPARTSTSKKTTPNATPPRDVPITPRTPLIGTPMEEEEEEEEEFYKTTNVEVSKKRSGKRWKFLCMIEWVGFVSIVGFLIVSLAIKRLRNSEIWGLELWKWCVLALVILCGRLVTGWFINVMVFLIERNFLFKKKVLYFVYGVKKSVQAFLWLGIVLMAWGLIFNHGIKRSRRVNRVLDYITRSLASCLIGAALWLAKMLLIKLLASHFQSARFFNRIQESIFHQYILRTLSGPPLMEIAENVGKNSSSSRLSFKTLVRENGNEEKKEEVIDVEKLKKMKQEKVSALTMKGLISVIKSSGLTTILPQSVDEDENEQIDSEITSELEAKEAAYRIFSNVAKPGSKYIQKEDLLRFMTNEEVENLLPLFEGAVATGRIKRKSLKNWLVKVYQERQSLVHSLNDTKTAVDDLNLLASVLIIIVIIIVWLLIMGFLTTHVLLFITSQLLLAVFIFGNSAKTVFEAIIFVFVRHPFDVGDRCVIDGVQMTVEEMNILTTIFLRFDNEKISYPNSVLANKPISNFYRSPEMSESIEFSVDMSTPIESIAALKSRIKS 664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g02217 664 MobiDBLite consensus disorder prediction 60 82 - -
Adu03g02217 664 Pfam Mechanosensitive ion channel 526 662 IPR006685 GO:0016020|GO:0055085
Adu03g02217 664 Coils Coil 376 396 - -
Adu03g02217 664 MobiDBLite consensus disorder prediction 113 141 - -
Adu03g02217 664 MobiDBLite consensus disorder prediction 113 130 - -
Adu03g02217 664 Gene3D - 583 632 IPR023408 -
Adu03g02217 664 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 18 663 - -
Adu03g02217 664 SUPERFAMILY Sm-like ribonucleoproteins 573 632 IPR010920 -
Adu03g02217 664 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 18 663 IPR016688 -
Adu03g02217 664 MobiDBLite consensus disorder prediction 60 95 - -
Adu03g02217 664 PIRSF Memb_At2g17000 9 664 IPR016688 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g02217 Adu-Chr3 44582928 44586439 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g02217 68 662 Mechanosensitive Ion Channel Family AT5G12080 51.163 0.0 609
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g02217 K22048 - gmx:100777332 823.542