Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g02203 ATGTCTGCATCAGTGAACATCATTGTAGGGTCTCATGTCTGGGTTGAAGATCCCACAGAAGCATGGATTGATGGAGAAGTTTCTAAGATCAGTGGCGAAGAAGTGCATGTTCGCTTGACAAATGGGAAAACGGCTATCAAAACTATCTCCAAGGTTTTTCCCAAGGATAATGAAGCTCCTCCTGGAGGTGTAGATGACATGACAAAACTCTCATACTTGCATGAGCCAGGAGTTCTACATAACTTGGCAACCAGATACGAACTCAATGAAATCTATACTTATACTGGCAATATCTTGATTGCGGTGAACCCATTTCAAAGGTTACCGCATCTATATGATACACATATGATGGAACAATATAAAGGTGCTACATTTGGAGAGTTGAGTCCCCATGTTTTTGCAGTTGCAGAAGTTGCATACAGGGCGATGATCAATGAAGGAAAAAGTAACTCAATCCTGGTTAGTGGTGAGAGTGGCGCTGGTAAGACAGAGACAACAAAGATGCTTATGCGATATCTTGCTTACCTTGGGGGCCGTTCTGGAGTAGAAGGGCGTACAGTTGAACAACAAGTTCTAGAATCTAATCCAGTTCTTGAAGCATTTGGCAATGCAAAAACAGTTAGGAACAATAATTCAAGTCGTTTTGGTAAATTTGTTGAGATCCAATTTGACAACAAGGGAAGGATATCCGGTGCAGCTATAAGAACTTACTTGCTCGAAAGGTCCCGTGTTTGTCAAATCTCAGATCCTGAGAGAAACTACCATTGCTTTTATCTTCTTTGTGCAGCTCCAACTGAGGTAAAAGAGAAGTATAAGTTGGGAAATCCTAGTTCATTCCATTACTTAAATCAATCCAAATGCTATGAACTGGATGGAGTTGATGATACCAATGAGTATATTGCAACTCGTAGGGCAATGGATGTTGTTGGAATAAGTGAGGAAGAGCAAGAGGCAATTTTTAGGGTTGTTGCAGCAATACTGCACCTTGGAAATGTTGAATTTTCAAAAGGAGAGGAGATTGATTCTTCTGTCATCAAAGATGAGAAGTCTAGGTTCCATCTTAGTACAACTGCCGAACTTCTCCAGTGTGATGCTAAGAGCTTGGAGGATGCACTGATCAAGCGTGTCATGATAACACCTGAGGAAGTCATTACGAGAACCCTGGATCCTGTTGCAGCTGTTGGTAGCAGGGATGCATTAGCTAAAACCATTTATTCCCGTTTGTTTGATTGGCTTGTGGAGAAGATTAATAATTCAATTGGGCAAGATCCAATTTCAAAGTCTATCATTGGAGTTCTTGATATCTATGGGTTTGAAAGTTTTAAGTTCAATAGTTTTGAGCAGTTCTGTATCAATTTTACTAATGAAAAGCTGCAACAACATTTTAATCAGCATGTCTTTAAAATGGAACAAGAAGAATACAGCAAGGAAGAGATTGACTGGAGCTACATAGAGTTTGTTGACAACCAAGATGTTTTGGATCTAATTGAGAAGAAACCTGGAGGAATAATTGCACTCCTCGATGAGGCCTGTATGTTCCCTAAGTCCACACATGAAACATTTGCTCAGAAGTTGTACCAGACATTCAACAAAAACAAGCGTTTTATCAAACCAAAACTTTCAAGGACTAGTTTTACCATATCTCATTATGCAGGAGAGGTGACATATCTGGCTGATATGTTTCTTGACAAAAACAAGGATTATGTGGTTGCAGAACATCAGGATCTGCTGACAGCCTCAAGATGCTCATTTGTGGCAGGTCTATTCCCCCCTTCTTCACAGGAGTCTTCAAAATCATCCAAGTTCTCCTCAATCGGGTCTCGCTTTAAGCTACAACTTCAGTCATTGATGGAAACCCTAAGTTCAACCGAACCTCACTATATCAGATGTGTGAAGCCAAACAATGTCCTCAAGCCTGCTATTTTTGAAAATCTCAACATTATTCAACAATTACGCTGTGGTGGTGTCCTCGAGGCTATTAGAATCAGCTGTGCAGGATATCCTACTAGACGGACCTTTTATGAGTTTCTTAATCGATTTGGTGTTCTTGCCCCTGAAGTTCTAGATGGAAACTTTGATGACAAGGTTGCATGTCAAAAGATCCTTGATAAAATGGGTATGAAAGGTTATCAGATAGGCAAGACCAAGGTTTTCCTGAGAGCTGGTCAAATGGCTGAGTTGGATGCAAGAAGAGCAGAAGTTCTTGGAAATGCAGCCAGAATCATTCAGAGACAAATAAGAACTCATGTTGCACGGAAGGAATTCTTTGAATTGCGTCAAGCTGCAGTTTGTTTGCAATCTAATTTGCGAGGTATATTGTCTCGGAAGCTATATGAGCAGTTGCGTCGCAACGCAGCAGCTTTGAAAATAGAGAAGAACTTTAAAGGATTCCTTGCCAGGAAATCTTACATAACAGCCCGATCATCCGCAATCACATTGCAGACAGGTTTAAGGGCTATGAAGGCTCGCAAGGAGTTTAGATTTCGGAAGCAAACTAAGGCTGCTATTCTTATCCAGGCTCATTTAAGAGGGCATATTGCACATTCTTACTATAAAGGACTGCAAAAGGCAGCAATTGTTACCCAATGTGGTTGGAGAAGAAGGGTTGCTAGGAGGGAACTTAGAAAGCTTAAAATGGCTGCAAGAGAAACAGGCGCCCTTCAAGATGCAAAGAACAAACTAGAAAAGCGTGTTGAAGAACTCACATGGCGTTTACAAATTGAGAAGCGATTAAGGACTGATTTGGAGGAGGAAAAAGCACAAGACATTGCCAAGTTAAAAGATGCTGTGCGTTCAATGCAAATACAAGTAGAAGAAGCAAATGCCATGGTCCTCAAAGAGCGTGAGGCAGCTTGGAAAGCCATTGAAGAAGCGCCTCCAGTTATTAAGGAGACTCCTGTTATAATTCAAGATACTCTGAAGATGAATTCCTTGATAGCTGAAGTCAGTAAGTTGAAGGAATCACTGCTATTGGAGAGGAAGGATAAAGAAGAGGCAAGAAAGGCTCAGTCTGAAGCTGAAACTAGAAACATCGAGCTGGTTAAGAAAGTTGATGATTACCAGGGCAAGGTGGTTCAACTCCAAGAAATGATTCAAAGGTTGGAGGACAAAATCTCCAATGCAGAGTCAGAAAATCAAGTGCTTCGTCAGCAAGCTCTAGCTGCATCTCCAACTGGAAAAGCTCTATCTGCAAGACCAAAGACAACAATTATTCAAAGGACACCAGAAAATGGGAAAGCCATAAATGGTGGTGGAAAAATTGGATCGGATTTGACTCTTGTATCAAATATACGTGAACCTGAATCTGAGGGAAAACCACAAAAACATCTAAATGAGAAACAGCAAGAAAACCAGGAGCTGTTGATCAAATGTATTTCACAAGATTTGGGATTTTCTAGGGGCAAACCTGTTGCTGCTTGTCTTATATATAAATGTCTTCTTCACTGGAGATCATTTGAAGCTGAACGGACAAGTGTCTTTGACCGTATCATTCAATCAATTGCTTCAGTTGTTGAGGCTCAGGATGATAATAACATAATAATAGCATATTGGTTGTCTAATACATCTACTTTGTTGTCACTACTTCAACGCACTCTCAAAGCAAGTGGAGCAGCTAGCTTAACACCCCAACGGCGGAGAACGGCATCGTCTTCTATGTTCGGAAGAATGTCTCAAGGGCTAAGAGCATCTCCCCAAAGTGCCGTGTCAGTTCAAAATAATAGAGGGATTGGCAGATTGGATGATTTGCGGCAAGTGGAAGCAAAATATCCAGCACTTCTGTTTAAGCAACAGCTTACTGCTTTCCTGGAAAAAGTATATGGAATGATAAGAGACAATCTGAAAAAAGAGATATCGCCGTTACTTGGATTGTGCATCCAGGCTCCAAGGACTTCACGGCAAAGTTTAGTGAAAGGACGTGCACGTGCTAATGCAGTTGCTCAACAAGCTTTAATTGCTCACTGGCAAAGTATTGTGAACGGCTTAAACAATGCTCTAAAGATAATGAAAGAAAATTAT 4017 0.4085 MSASVNIIVGSHVWVEDPTEAWIDGEVSKISGEEVHVRLTNGKTAIKTISKVFPKDNEAPPGGVDDMTKLSYLHEPGVLHNLATRYELNEIYTYTGNILIAVNPFQRLPHLYDTHMMEQYKGATFGELSPHVFAVAEVAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGVEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDNKGRISGAAIRTYLLERSRVCQISDPERNYHCFYLLCAAPTEVKEKYKLGNPSSFHYLNQSKCYELDGVDDTNEYIATRRAMDVVGISEEEQEAIFRVVAAILHLGNVEFSKGEEIDSSVIKDEKSRFHLSTTAELLQCDAKSLEDALIKRVMITPEEVITRTLDPVAAVGSRDALAKTIYSRLFDWLVEKINNSIGQDPISKSIIGVLDIYGFESFKFNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYSKEEIDWSYIEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFAQKLYQTFNKNKRFIKPKLSRTSFTISHYAGEVTYLADMFLDKNKDYVVAEHQDLLTASRCSFVAGLFPPSSQESSKSSKFSSIGSRFKLQLQSLMETLSSTEPHYIRCVKPNNVLKPAIFENLNIIQQLRCGGVLEAIRISCAGYPTRRTFYEFLNRFGVLAPEVLDGNFDDKVACQKILDKMGMKGYQIGKTKVFLRAGQMAELDARRAEVLGNAARIIQRQIRTHVARKEFFELRQAAVCLQSNLRGILSRKLYEQLRRNAAALKIEKNFKGFLARKSYITARSSAITLQTGLRAMKARKEFRFRKQTKAAILIQAHLRGHIAHSYYKGLQKAAIVTQCGWRRRVARRELRKLKMAARETGALQDAKNKLEKRVEELTWRLQIEKRLRTDLEEEKAQDIAKLKDAVRSMQIQVEEANAMVLKEREAAWKAIEEAPPVIKETPVIIQDTLKMNSLIAEVSKLKESLLLERKDKEEARKAQSEAETRNIELVKKVDDYQGKVVQLQEMIQRLEDKISNAESENQVLRQQALAASPTGKALSARPKTTIIQRTPENGKAINGGGKIGSDLTLVSNIREPESEGKPQKHLNEKQQENQELLIKCISQDLGFSRGKPVAACLIYKCLLHWRSFEAERTSVFDRIIQSIASVVEAQDDNNIIIAYWLSNTSTLLSLLQRTLKASGAASLTPQRRRTASSSMFGRMSQGLRASPQSAVSVQNNRGIGRLDDLRQVEAKYPALLFKQQLTAFLEKVYGMIRDNLKKEISPLLGLCIQAPRTSRQSLVKGRARANAVAQQALIAHWQSIVNGLNNALKIMKENY 1339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g02203 1339 Coils Coil 1017 1051 - -
Adu03g02203 1339 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 35 785 IPR027417 -
Adu03g02203 1339 CDD MYSc_Myo11 76 720 IPR036018 -
Adu03g02203 1339 Gene3D - 667 733 - -
Adu03g02203 1339 Gene3D Myosin VI head, motor domain, U50 subdomain 312 601 - -
Adu03g02203 1339 ProSiteProfiles IQ motif profile. 806 835 IPR000048 GO:0005515
Adu03g02203 1339 Pfam Myosin N-terminal SH3-like domain 9 44 IPR004009 GO:0003774|GO:0005524|GO:0016459
Adu03g02203 1339 Coils Coil 923 943 - -
Adu03g02203 1339 ProSiteProfiles IQ motif profile. 783 812 IPR000048 GO:0005515
Adu03g02203 1339 Coils Coil 877 918 - -
Adu03g02203 1339 Pfam Myosin head (motor domain) 64 720 IPR001609 GO:0003774|GO:0005524|GO:0016459
Adu03g02203 1339 ProSiteProfiles IQ motif profile. 758 787 IPR000048 GO:0005515
Adu03g02203 1339 Gene3D Kinesin motor domain 65 662 IPR036961 -
Adu03g02203 1339 ProSiteProfiles Myosin motor domain profile. 62 732 IPR001609 GO:0003774|GO:0005524|GO:0016459
Adu03g02203 1339 SMART iq_5 734 756 IPR000048 GO:0005515
Adu03g02203 1339 SMART iq_5 830 852 IPR000048 GO:0005515
Adu03g02203 1339 SMART iq_5 853 875 IPR000048 GO:0005515
Adu03g02203 1339 SMART iq_5 782 804 IPR000048 GO:0005515
Adu03g02203 1339 SMART iq_5 757 779 IPR000048 GO:0005515
Adu03g02203 1339 SMART iq_5 805 827 IPR000048 GO:0005515
Adu03g02203 1339 SMART MYSc_2a 56 733 IPR001609 GO:0003774|GO:0005524|GO:0016459
Adu03g02203 1339 ProSiteProfiles IQ motif profile. 854 883 IPR000048 GO:0005515
Adu03g02203 1339 PANTHER MYOSIN-5 6 1339 - -
Adu03g02203 1339 ProSiteProfiles Dilute domain profile. 1161 1339 IPR002710 -
Adu03g02203 1339 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 8 57 IPR004009 GO:0003774|GO:0005524|GO:0016459
Adu03g02203 1339 Gene3D - 252 310 - -
Adu03g02203 1339 ProSiteProfiles IQ motif profile. 737 761 IPR000048 GO:0005515
Adu03g02203 1339 PANTHER MYOSIN 6 1339 - -
Adu03g02203 1339 Pfam IQ calmodulin-binding motif 759 778 IPR000048 GO:0005515
Adu03g02203 1339 Pfam IQ calmodulin-binding motif 807 827 IPR000048 GO:0005515
Adu03g02203 1339 Pfam IQ calmodulin-binding motif 737 755 IPR000048 GO:0005515
Adu03g02203 1339 Pfam IQ calmodulin-binding motif 832 852 IPR000048 GO:0005515
Adu03g02203 1339 Pfam IQ calmodulin-binding motif 856 875 IPR000048 GO:0005515
Adu03g02203 1339 Gene3D - 439 623 - -
Adu03g02203 1339 ProSiteProfiles IQ motif profile. 831 857 IPR000048 GO:0005515
Adu03g02203 1339 PRINTS Myosin heavy chain signature 429 457 IPR001609 GO:0003774|GO:0005524|GO:0016459
Adu03g02203 1339 PRINTS Myosin heavy chain signature 149 174 IPR001609 GO:0003774|GO:0005524|GO:0016459
Adu03g02203 1339 PRINTS Myosin heavy chain signature 92 111 IPR001609 GO:0003774|GO:0005524|GO:0016459
Adu03g02203 1339 PRINTS Myosin heavy chain signature 196 223 IPR001609 GO:0003774|GO:0005524|GO:0016459
Adu03g02203 1339 PRINTS Myosin heavy chain signature 482 510 IPR001609 GO:0003774|GO:0005524|GO:0016459
Adu03g02203 1339 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 785 883 IPR027417 -
Adu03g02203 1339 SUPERFAMILY PspA lactotransferrin-binding region 973 1049 - -
Adu03g02203 1339 Gene3D - 786 832 - -
Adu03g02203 1339 Gene3D - 735 785 - -
Adu03g02203 1339 Gene3D - 833 882 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g02203 Adu-Chr3 43556644 43569947 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g02203 67 1338 Myosins gene family AT5G20490 79.733 0.0 2089
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g02203 K10357 - gmx:100777802 2330.06