Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g02200 ATGAAGAAAGGGTGCTTAGGACCCAATCTGAAGCTCACTGTTCCTGTTCCTGCAACTCATCACCCTTCTTTTCCAAGCTTCCTGAATGAAAGCGGCACGTTTATTGATGGGAACCTGCTTGTCAATGGCGACGGAGTTCTGATCGCTTCTCAGGGTGAAGTGGGAACTCCACCCCCAGTAAGGGCAATAGACAACAAACTAAGTTTGGCAGACATTGACACAATCAAAGTGATTGGAAAGGGAAATGGAGGGATAGTGCAGTTGGTGCAACACAAATGGACTAATCAATTTTTCGCATTAAAGGAAATCCGAATGATGGTTGAGGAGCCTATGCACACGCAGATAGCACGAGAGCTAAAAATCAATCAGTCGGCACAATGTCCATATGTTGTTGTCTACTACCAATCATTCTACAATAATGGGGTCTTATCAATCATCTTAGAGTACATGGATGGAGGGTCCTTGGAAGATTTTCTTAGCATAGTGAAAACAATTCCAGAGCCATATCTTGCCGCGATCTGCAAGCAGGTGCTGAAGGGTTTAATTTATCTTCATCATGAAAAACATATTATCCATAGGGACTTAAAGCCTTCTAATTTGTTGATAAATCATAGAGGAGAAGTAAAGATTACTGATTTTGGTGTGAGCGCAATCATGGACACCACATCTGGTCTAGCTAATACTTTTATTGGCACATACAGCTACATGTCTCCAGAGAGAATTACTGGAAACCCTGGTGGTTACAACTATAGAAGTGATATATGGAGCTTGGGACTGATATTGCTCAAGTGTGCTACAGGAAAGTTTCCATATACACCACCTGATAAAAAAGAAGGATGGGAAAATATCTACCAGCTTATTGAAATCATTGTCGAAAAACCTCCGCCGAGTGCTCCATCTGATCAATTTTCTCTGGAATTTTGTTCTTTCATCTCTGCATGTTTACAGAAAAATCCAAGGGATAGAAAGTCAGCTCCAGACCTTGCGAGACATCCATTTATCAACATGTATGAGGACTTGGATGTGGACCTTTCAGCATACTTCTCCAATGGAGGATCTACACCTGCAACCATATAA 1077 0.416 MKKGCLGPNLKLTVPVPATHHPSFPSFLNESGTFIDGNLLVNGDGVLIASQGEVGTPPPVRAIDNKLSLADIDTIKVIGKGNGGIVQLVQHKWTNQFFALKEIRMMVEEPMHTQIARELKINQSAQCPYVVVYYQSFYNNGVLSIILEYMDGGSLEDFLSIVKTIPEPYLAAICKQVLKGLIYLHHEKHIIHRDLKPSNLLINHRGEVKITDFGVSAIMDTTSGLANTFIGTYSYMSPERITGNPGGYNYRSDIWSLGLILLKCATGKFPYTPPDKKEGWENIYQLIEIIVEKPPPSAPSDQFSLEFCSFISACLQKNPRDRKSAPDLARHPFINMYEDLDVDLSAYFSNGGSTPATI 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g02200 358 ProSitePatterns Protein kinases ATP-binding region signature. 78 101 IPR017441 GO:0005524
Adu03g02200 358 Gene3D Transferase(Phosphotransferase) domain 1 152 354 - -
Adu03g02200 358 ProSiteProfiles Protein kinase domain profile. 72 334 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu03g02200 358 SMART serkin_6 72 334 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu03g02200 358 SUPERFAMILY Protein kinase-like (PK-like) 70 339 IPR011009 -
Adu03g02200 358 ProSitePatterns Serine/Threonine protein kinases active-site signature. 190 202 IPR008271 GO:0004672|GO:0006468
Adu03g02200 358 PANTHER MAP KINASE KINASE 1 358 - -
Adu03g02200 358 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 1 358 - -
Adu03g02200 358 Pfam Protein kinase domain 74 334 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu03g02200 358 Gene3D Phosphorylase Kinase; domain 1 60 151 - -
Adu03g02200 358 CDD PKc_MAPKK_plant_like 70 338 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g02200 Adu-Chr3 43322440 43325687 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g02200 30 353 MAP Kinase Kinase Gene Family AT4G26070 64.506 1.21e-158 446
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE7 Adu03g02200 Pkinase 4.9e-66 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g02200 K20603 - gmx:100789241 548.125
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu03g02200 03 43322440 43325687 Adu03g02200 03 43322440 43325687 ECH
Adu01g02032 01 87262479 87266396 Adu03g02200 03 43322440 43325687 PCT