Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g02198 ATGCATGATCATCGAGAAGAGGAAAGGGAAGAAGGGAAGGTGAAAGAAGCCATGGCAGTTGACGACGAGGAAGAAAAAGAAGATGACGACGAGGAAGAAGAAGAGGGAGAGGAAGAGGAAGAGGAAGAAGGAACCACAGGTTCGAGTTTGACCATGGAGAGGGTTGCTGTAGCTAAGGAATTCATTGAAAACCATTACAAGGCTCATATGAAACATATCCAAGATCGCAAAGAAAGGCGTTTAGTACTAGAAAAGAAGCTAGCATCTTCTCATGTACCAGAAGAGGAACAAATCAATCTATTAAAAGATTTAGAGCGAAAGGAGACGGAGTATATCCGATTAAAAAGAAACAAAATATGTGTTGATGATTTTGACCTTCTAACAATTATTGGCAGAGGAGCCTTTGGCGAGGTAAGACTCTGTCGGGAGAAGAAATCAGGTCACATATACGCCATGAAAAAGTTGAAGAAGTCTGAAATGCTCCGTAGGGGACAGGTTGAGCATGTTAGAGCGGAAAGGAATGTACTTGCAGAAGTTGCAAGTGAGTGCATTGTGAAGCTCTATTACTCTTTTCAAGATGATGAATACTTATATCTTATAATGGAGTATTTACCTGGTGGTGATATAATGACTTTGCTTATGAGAGAGGAAATTTTGACCGAAACTATGGCCAGATTTTACATTGCGCAAACTGTTTTGGCAATAGAGTCTATTCATAAACACAATTACATTCATCGAGACATAAAACCTGATAACCTTCTATTGGACAAAAATGGTCATATGAAGCTCTCTGATTTTGGTCTTTGCAAGCCACTTGACTGTTCTAATTTATCATCTATAAATGAAAATGAAGTTCTGGATGATGAGAACTTGAATGATACCATGGATATTGATGGATCCAACCCAAATAAAAGAAATGGAAGGCGCTGGAAAAGTCCCCTTGAACAACTTCAACATTGGCAAATGAATCGGAGGAAGTTGGCATTTTCCATGGTTGGTACTCCGGACTATATTTCTCCCGAGGTGCTACTAAAAAAAGGCTATGGTGCAGAATGTGACTGGTGGTCTCTTGGTGCTATATTGTATGAGATGCTTATTGGTTATCCTCCATTTTATTCTGATGACCCTATAACAACATGTAGAAAGATTGTGCATTGGAAAAATCACTTAAAATTTCCAGTTGAGATAAGGTTGAGTCCAGAAGCAAGGGATCTAATATGTAGGTTACTTGTTGATGCTCCACAAAGGCTTGGTACTAATGGAGCTTATGAAATTAAAGCTCATCCTTGGTTCAAAAATGTTGAATGGGATAGGCTTTATGAAATGGAGGCAGCATTTATACCACAGGTCGATGGAGAGCTTGACACTCAAAATTTTATGAAATTTAATGAGGTTGAAGCAGAACAACCAAAACCAACTAGAAGCGCATCAGGACCGATCAGAAAAAAATTGTTAACTCCTCAAGATCTCAGTTTTGTTGGCTATACATATAAAAATTTTGCTGCTATTAAGGGAACACGCCATTCTATTGATATGTTGTCTTTGTCAACCCCACAACGCACATCATCCATTGACTCTACACAAAGTGATTCTGCAATTGACTATTCCACATGA 1614 0.3885 MHDHREEEREEGKVKEAMAVDDEEEKEDDDEEEEEGEEEEEEEGTTGSSLTMERVAVAKEFIENHYKAHMKHIQDRKERRLVLEKKLASSHVPEEEQINLLKDLERKETEYIRLKRNKICVDDFDLLTIIGRGAFGEVRLCREKKSGHIYAMKKLKKSEMLRRGQVEHVRAERNVLAEVASECIVKLYYSFQDDEYLYLIMEYLPGGDIMTLLMREEILTETMARFYIAQTVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSNLSSINENEVLDDENLNDTMDIDGSNPNKRNGRRWKSPLEQLQHWQMNRRKLAFSMVGTPDYISPEVLLKKGYGAECDWWSLGAILYEMLIGYPPFYSDDPITTCRKIVHWKNHLKFPVEIRLSPEARDLICRLLVDAPQRLGTNGAYEIKAHPWFKNVEWDRLYEMEAAFIPQVDGELDTQNFMKFNEVEAEQPKPTRSASGPIRKKLLTPQDLSFVGYTYKNFAAIKGTRHSIDMLSLSTPQRTSSIDSTQSDSAIDYST 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g02198 537 SMART pkinase_C_6 432 499 IPR000961 GO:0004674|GO:0005524|GO:0006468
Adu03g02198 537 ProSitePatterns Serine/Threonine protein kinases active-site signature. 243 255 IPR008271 GO:0004672|GO:0006468
Adu03g02198 537 MobiDBLite consensus disorder prediction 1 52 - -
Adu03g02198 537 ProSiteProfiles AGC-kinase C-terminal domain profile. 432 507 IPR000961 GO:0004674|GO:0005524|GO:0006468
Adu03g02198 537 Gene3D Phosphorylase Kinase; domain 1 450 460 - -
Adu03g02198 537 Gene3D Phosphorylase Kinase; domain 1 122 207 - -
Adu03g02198 537 PANTHER SERINE/THREONINE-PROTEIN KINASE 43 536 - -
Adu03g02198 537 MobiDBLite consensus disorder prediction 1 20 - -
Adu03g02198 537 Coils Coil 20 40 - -
Adu03g02198 537 Pfam Protein kinase domain 322 431 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu03g02198 537 Pfam Protein kinase domain 126 275 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu03g02198 537 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 43 536 - -
Adu03g02198 537 Gene3D Transferase(Phosphotransferase) domain 1 326 449 - -
Adu03g02198 537 Gene3D Transferase(Phosphotransferase) domain 1 208 273 - -
Adu03g02198 537 ProSiteProfiles Protein kinase domain profile. 124 431 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu03g02198 537 MobiDBLite consensus disorder prediction 517 537 - -
Adu03g02198 537 CDD STKc_NDR_like 122 498 - -
Adu03g02198 537 SMART serkin_6 124 431 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu03g02198 537 ProSitePatterns Protein kinases ATP-binding region signature. 130 153 IPR017441 GO:0005524
Adu03g02198 537 SUPERFAMILY Protein kinase-like (PK-like) 121 477 IPR011009 -
Adu03g02198 537 MobiDBLite consensus disorder prediction 21 46 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g02198 Adu-Chr3 43149624 43163532 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g02198 35 536 AGC Kinase Gene Family AT2G19400 73.214 0.0 759
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_NDR Adu03g02198 Pkinase 7.8e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g02198 K08790 - gmx:100802177 828.935