Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g02174 ATGTTTTCTCAACAAGAGGAGGATCTTATAATCACTCTCCATGAGGTTCTTGGaaatagGTGGGCACAGATTGCAGCACAGTTACCAGGAAGAACAGATAATGAGATAAAGAATTTCTGGAATTCATGTCTGAAGAAGAAGCTAATGAAGCAAGGGATTGATCCAACTACACACAAGCCTCTTCATAATCATGAAGAAGACAAAGATAATGATATTAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATACAACAACACAAGCAGCATGTTCTTCTTCTTCTTCCATGGCAATGTTAGATGGAATTATTGGAGGAGTTTCATCATTATCATCATCATCATTATTATTAGACCCTTTGACATGCTTGGATTTTTCTCATCATCATCATGAAAACTATGGATTATTATTCTCTTCAATGCCAAGCCTAGAAATGAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATGCATTGCTCTCATCAACATCATCATGGGATTGTTGTAGTAATGAAGAGGAGAATAACAAGTTAGAATCTTTGTTTCAGTTTCATCATCAACAAGTCAATGCAATCAAATCTGAGCAGGAATTCAATACAAATTATAATAATGTGCAGCAGAATTCAATGCAAGAAGATTTCATCAGCAGCTATAATAATTTAAGGTCACTCTCATCAGAAGATCTATCAGCAGCAGCAGCAGGACCAAATTTTGATGTATTCCACCAGATATGA 753 0.3134 MFSQQEEDLIITLHEVLGNRWAQIAAQLPGRTDNEIKNFWNSCLKKKLMKQGIDPTTHKPLHNHEEDKDNDINNNNNNNNNNNNNNNTTTQAACSSSSSMAMLDGIIGGVSSLSSSSLLLDPLTCLDFSHHHHENYGLLFSSMPSLEMNNNNNNNNNNNNNNNALLSSTSSWDCCSNEEENNKLESLFQFHHQQVNAIKSEQEFNTNYNNVQQNSMQEDFISSYNNLRSLSSEDLSAAAAGPNFDVFHQI 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g02174 250 CDD SANT 2 41 IPR001005 -
Adu03g02174 250 MobiDBLite consensus disorder prediction 73 93 - -
Adu03g02174 250 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 48 IPR017930 -
Adu03g02174 250 Pfam Myb-like DNA-binding domain 2 43 IPR001005 -
Adu03g02174 250 Gene3D - 1 48 - -
Adu03g02174 250 SMART sant 2 46 IPR001005 -
Adu03g02174 250 SUPERFAMILY Homeodomain-like 2 54 IPR009057 -
Adu03g02174 250 MobiDBLite consensus disorder prediction 54 93 - -
Adu03g02174 250 PANTHER MYB DOMAIN PROTEIN 55 1 165 - -
Adu03g02174 250 MobiDBLite consensus disorder prediction 54 72 - -
Adu03g02174 250 ProSiteProfiles Myb-like domain profile. 1 44 IPR001005 -
Adu03g02174 250 PANTHER MYB TRANSCRIPTION FACTOR 1 165 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g02174 Adu-Chr3 42311259 42312359 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g02174 2 66 MYB Transcription Factor Family AT1G57560 75.385 3.21e-31 114
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Adu03g02174 Myb_DNA-binding 7.1e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g02174 K09422 - pvy:116119624 152.525