Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g02162 ATGAACCTCACTTCTCATTCTTCACACAACACAACAATGGCTGCTGCGACTTCTCCCACTGTTCCTATGGAAGAAGAAGATGACGTCACAGCCACAGCCACAAACCAAAACCTTCAAACTCATCAAAACGGCGTCGTTCCTTCCTCTCCCATGATTCCCGTTCCCGACGACAAGATCGTTCTCCCTGTTGAGGTCTGCTTGAAGCCTTCCAGCACTGCTTCTATCCGTGACGTTCGTTCCGCTATCGAAAGGATGCTTGAGAAGAGGAGTTTGAGCTATTGTGATGGCCCCATTCCTCTCCCCATGGACGAACCCTTTCTCGCCGACAACGTCCACAGAATTTGTATTTGTGACACAGATGAAGGGATGCACAATGATAATGTTCTTTTGTTCTGGCAAGTCAAGCCAGTTGTCCATGTCTTTCAGCTTAGCGAGGAAGGACCATGTGAGGATATAAGCTCTGATGGCCAGAGTTCCAGCTTCAATGAATGGATTCTTCCTGCAAAAGAATTTGATGGCATGTGGGAAAGTTTAATATTCGAATCTGGTCTAAAGCAAAGGTTGTTACGTTATGCAGCTAGTGCTTTGCTCTTTACTGAAAAAGGTGTTGATCCATTCCTTGTTTCATGGAATCGTATAATTCTTCTACATGGACCCCCTGGGACTGGAAAGACTTCGTTATGTAAAGCATTAGCTCAGAAATTATCGATTCGATTCAATTCAAGATTCCCACAGTGCCAGCTTATTGAAGTGAATGCACATTCTTTATTCAGTAAATGGTTTTCTGAAAGTGGCAAGCTGGTTGCGAAACTTTTCCAAAAGATTCAAGAAATGGTAGAGGAAGAAAGCAATCTAGTATTTGTTTTGATTGATGAAGTCGAAAGCCTTGCTGCGGCCAGGAAAGCTGCTATATCCGGTTCAGAACCTTCAGATTCTATTCGGGTTGTAAATGCATTACTAACTCAGATTGACAAGTTAAAATCGTCTCCAAATGTGATAATCCTAACCACATCCAACATAACTGCTGCTATTGATATTGCTTTTGTCGACCGAGCTGATATTAAAGCATATATTGGTCCCCCGACACTTCAAGCTCGATATGAAATATTAAGGTCTTGCTTGCAGGAATTGATGCGTACGGGGATCTTAACTAGTTTACAGGTGCAGAAAATTCTCAGTCATATCCAAGAAACTTTTCTGGAACGAATGAAAGGCATTAATGTTGTGATCTTTATTCTGGTTTGGGCATTGTGGCATATCTGTCTATGGATATCTGTCTATGGCTAA 1287 0.4235 MNLTSHSSHNTTMAAATSPTVPMEEEDDVTATATNQNLQTHQNGVVPSSPMIPVPDDKIVLPVEVCLKPSSTASIRDVRSAIERMLEKRSLSYCDGPIPLPMDEPFLADNVHRICICDTDEGMHNDNVLLFWQVKPVVHVFQLSEEGPCEDISSDGQSSSFNEWILPAKEFDGMWESLIFESGLKQRLLRYAASALLFTEKGVDPFLVSWNRIILLHGPPGTGKTSLCKALAQKLSIRFNSRFPQCQLIEVNAHSLFSKWFSESGKLVAKLFQKIQEMVEEESNLVFVLIDEVESLAAARKAAISGSEPSDSIRVVNALLTQIDKLKSSPNVIILTTSNITAAIDIAFVDRADIKAYIGPPTLQARYEILRSCLQELMRTGILTSLQVQKILSHIQETFLERMKGINVVIFILVWALWHICLWISVYG 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g02162 428 MobiDBLite consensus disorder prediction 1 30 - -
Adu03g02162 428 Pfam ATPase family associated with various cellular activities (AAA) 214 359 IPR003959 GO:0005524|GO:0016887
Adu03g02162 428 Gene3D - 153 378 IPR027417 -
Adu03g02162 428 PRINTS ATP-dependent Clp protease ATP-binding subunit signature 214 232 IPR001270 GO:0005524
Adu03g02162 428 PRINTS ATP-dependent Clp protease ATP-binding subunit signature 328 342 IPR001270 GO:0005524
Adu03g02162 428 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 166 378 IPR027417 -
Adu03g02162 428 SMART AAA_5 210 362 IPR003593 -
Adu03g02162 428 PANTHER PACHYTENE CHECKPOINT PROTEIN 2 52 393 IPR044539 -
Adu03g02162 428 ProSitePatterns AAA-protein family signature. 332 351 IPR003960 GO:0005524|GO:0016887
Adu03g02162 428 CDD AAA 212 360 - -
Adu03g02162 428 MobiDBLite consensus disorder prediction 1 18 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g02162 Adu-Chr3 42191606 42196675 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g02162 214 391 Calmodulin-binding Proteins AT3G56690 29.444 1.03e-13 71.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g02162 K22399 - gmx:100812167 619.772
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu03g02162 03 42191606 42196675 Adu03g02162 03 42191606 42196675 ECH