Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g02118 ATGGATACGTTTATGACTACCACCCGGGTGTTACCAGAACCCGACCTTTACCTATACACTTCAGTCTCAACACCCATTCCAGTTCATGCCAGCATCTTGGCTTCGGCATCACCGGTTTTAGAGAACATCATAATGTCCAACAAAATCATCAAAATCTCCGGCGTTCCGCACCGAGCTGTCATTGCCTTCCTACGCTTCCTCTATTCCTTCAGGTGCAGGAAGGAGGAGATGGAGAAGTACGGAATGCACCTTCTAGCGCTATCGCACGTGTACGCGGTGCCGGAGCTGAAGAAAAGGTGCGTGAAAGCAGTGGGGGAGCACGTGACAGAGGAGAGCGTGGTAGACGTGTTGCAACTGTCGCGGCTCTGCGACGCACCGGATCTTTATCTCAAGTGCGTGAAGTTGGTGGATGATCGGTTCAAGAAGGTGGAGAGAACTGAGGGATGGAGATTCTTACAGAACCATGACCCTGCTCTCGAGCTAGATATCCTCTGTATTCTTGACGACAACGATAACAGGAAGAAGAGATTGATGATGAGGAAGAGACAAGAGAAGGTGTACTTGCAACTGAGTAAAGCAATGGAGTGTTTGGAACACATTTGTACGGAAGGGTGCACCAATGTGGGGCCCTACGATGTGGAACTTCGAAAGGGGAGAGAACCATGCACCAAGTTTGGTGACACGTGTCAGGGGATGCAAGCTTTGATACAACACTTTGCCACGTGTACGAACGGGAATAGTGGAGGCTGCATGAGGTGCAAGCGCATGTGGCAGCTCTTTAGGCTTCACTCCTCCATTTGCCATCGCCATGATTCCTGCAAGGTCCCTCTTTGCAGACAAATTGAATTGAAGAGGCAAGAAGAGAAGAGAAAAGATGATGGAAGATGGAGACTACTTGTGAGGAAGGTGGCTTCAGCCAAAGCCATGTCATCTTTGTCACTCTCAAACACCAAGTGTGGGTTCAACAAATTCTAG 975 0.4933 MDTFMTTTRVLPEPDLYLYTSVSTPIPVHASILASASPVLENIIMSNKIIKISGVPHRAVIAFLRFLYSFRCRKEEMEKYGMHLLALSHVYAVPELKKRCVKAVGEHVTEESVVDVLQLSRLCDAPDLYLKCVKLVDDRFKKVERTEGWRFLQNHDPALELDILCILDDNDNRKKRLMMRKRQEKVYLQLSKAMECLEHICTEGCTNVGPYDVELRKGREPCTKFGDTCQGMQALIQHFATCTNGNSGGCMRCKRMWQLFRLHSSICHRHDSCKVPLCRQIELKRQEEKRKDDGRWRLLVRKVASAKAMSSLSLSNTKCGFNKF 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g02118 324 Pfam BTB/POZ domain 15 104 IPR000210 GO:0005515
Adu03g02118 324 ProSiteProfiles BTB domain profile. 14 76 IPR000210 GO:0005515
Adu03g02118 324 SUPERFAMILY POZ domain 25 103 IPR011333 -
Adu03g02118 324 Pfam TAZ zinc finger 191 278 IPR000197 -
Adu03g02118 324 SMART BTB_4 14 108 IPR000210 GO:0005515
Adu03g02118 324 Gene3D - 108 181 - -
Adu03g02118 324 Gene3D Potassium Channel Kv1.1; Chain A 14 106 IPR011333 -
Adu03g02118 324 Gene3D TAZ domain 182 307 IPR035898 -
Adu03g02118 324 PANTHER BTB/POZ AND TAZ DOMAIN-CONTAINING PROTEIN 3-RELATED 6 318 IPR044513 -
Adu03g02118 324 CDD BACK 109 152 - -
Adu03g02118 324 SMART TAZ_2 184 279 IPR000197 -
Adu03g02118 324 PANTHER BTB/POZ AND TAZ DOMAIN-CONTAINING PROTEIN 2 6 318 - -
Adu03g02118 324 SUPERFAMILY TAZ domain 183 281 IPR035898 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g02118 Adu-Chr3 41786831 41790226 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TAZ Adu03g02118 BTB 7.4e-09 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g02118 - - qsu:112013900 409.453
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu03g02118 03 41786831 41790226 Adu03g02118 03 41786831 41790226 ECH
Adu01g01627 01 50928054 50932065 Adu03g02118 03 41786831 41790226 PCT