Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu03g02112 ATGGCGGAAGCAAACGGCGACGTTTTCCAGTGGCTGAAGTCGATGCCGTTAGCGCCGGAGTACAGGCCGACACTAACGGAATTCCAAGATCCGATCGCCTACATTTTCAAGATCGAGAAGGAAGCTTCCAAGTACGGAATCTGCAAGATCATACCGCCGTTTCCACCGCCGCCGAGGAAGGTTGCAATTGCCAACTTCACTCGCTCGCTGACTAAGCCCGACGAGCCTAACTCAAAGCCTACATTCACCACTCGCCAGCAGCAGATCGGGTTCTGCCCCCGCCGGCCCAGGCCCGTTCAGAGGCCCGTGTGGCAAAGCGGTGAGAACTACACTTTTCAGGAATTCGAGGCTAAGGCCAAAGCATTCGAGAAGAGCTACCTCAAGAAGCATCATCTTCACCACCAAGGCCACCGGAAGGGAGGAGGAGGTGGTGGTGGTTCCGGTGGCCTAGGGCCTCTCGAGGTGGAGACGCTGTTCTGGAAGGCGACCGTTGACAAGCCGTTCTCGGTGGAGTATGCGAACGACATGCCGGGCTCGGCGTTCAGCCGGAAATGCAGGGAGGAGTGTGCGGCGGCGCTAGCGGAGTCGGCGTGGAATATGAGGGAGATTTCGAGGGCGAATGGTTCTTTGTTGAGGTTCATGAAGGAGGAGATACCTGGTGTTACTTCTCCTATGGTGTATTTGGCTATGTTGTTCAGCTGGTTCGCTTGGCATGTTGAGGACCATGACCTCCATAGCTTGAATTACCTTCACATGGGTTCTGGGAAGACCTGGTATGGCGTGCCGAGAGATGCAGCCGTTGCGTTCGAAGATGTTGTTAGGGTTCATGGATATGGCTCTGAGATTAATCCTCTTGTTACTTTTTCTACTCTTGGCGAGAAAAACACAGTGATGTCACCTGAAGTATTGATAAACGCAGGTGTTCCATGCTGCAGGTTGGTTCAAAATGCTGGGGAGTTTGTTGTGACTTTTCCAAGAGCTTATCACACAGGGTTTAGTCATGGTTTTAATTGTGGAGAGGCAGCCAATATTGCAACGCCTGAATGGTTGAGAGTTGCAAAAGATGCTGCTATTCGGAGGGCTTCAGTAAATCATTCTCCTATGGTTTCACATTTCCAGTTACTTTATGACCTAGCCTTAGCTTTGTGTTCTAGAATTCCAGAACTATTTGTCCAGGATGTGTCACAGAATAATGATCTGCTTCAAGAACTCAGCAAGGGATCTGAGATTATACTTCTACCTCGTAGCTCATTTGACATTTCTCTTTGCTCAAAATTACGATCTGGATCCAAACAACGGAAAGTGAACTCTCGATTTTCCCTTGGTGCATGCAACTCCGAGGAAATGAATTCCTCAAAAGGTTTTGTTTCTGATGATCTGGCATTCAGCATGAACAGAGGAATCAAGCAAGAAGGTTCCCTTTCTATAAAAGACAAGATTACTTCATTGTGTGAAAGGAGCATGATTTCCTCATATGATGTAAATGGCAACATCTGCTCTTCAAGTTCCAAGCAACTTCAAGGTGACAATGAAAGAGAAAGTGGTGAAGGGGATGGTTCGCCAGATAAGAGACTTTTTTCATGTGTCACATGCGGAATATTGTGCTTTCCTTGTGTAGCTATTGTACAGCCTAGAGAATCTGCTGCTAGATATCTCATGTCAGCTGATTGTAGTTTCTTTAACGATTGGGTTGTTGGTTCTGGAGTGTCTAGCAAAAAGTTTATTGCCCATGAAGAAGCGGCTTTTCCTGAACCAAGTATGTATGCAGGGTGGACAGAAAAGAAGACCCAAGGATTGTATCAGGATCCTGTTCAATCTGCCCAGTATCAGCTACAGACTGCTGAGCGTAATTATGAGGAGTCCCTTGGAAAAAGCAATACAGCTCTTGCATTGTTGGCTTCAACATATGGAAATTCTTCCGACTCTGAGGAAGAGCATGGTGACTCAGATATTGTAGTTGATGGTCATGAATCACCTATGATTAATGCCACATTAGGAGGATCACCATCTAATTTTCAAGATGGCTGTACTATTCCCCTCACTGGACCTGATAGCAGAAATGATTTTAGTCATCAATCTTTTGACCACTCTTTAGAAAAACAGGATTGTGATACTTCTTCAGGGTTTGCATTAAAAAATATGAGGGCAATGTATACCAATGATACTGAAAAAACATTGTTGGGCAAGGCTATGGTTCCAAATGATGATAAAAATGCCTCAGTGATGCCACAAGGTGATCAAGACTCATCTAGAATGCATGTCTTCTGTCTGGAGCATGCTGTAGAAGCAGAGCAGCAACTTCGCCCAATAGGTGGAGCCCACATAATGCTCCTATGTCATCCAGATTTCCCCAAGATAGAGGCTGAAGCTAAGCTTGTAGCAGAAGATCTTGGGATTGATTACCTGTGGAAGAAGATTGAGTACAGGCATTCCAGCAAGGAGGATGAGGAGAGGATCCAGGTAGCCCTGGATAGTGAGGAAGCTATTCCTGGGAATGGGGACTGGTGTGTGAAGCTGGGAATCAATCTTTTCTACAGTTCAACTCTTAGCCGTTCTCCTCTTTACAGTAAGCAGATGCCTTACAATTCTGTCATATATTATGCATTTGGCCAAAGCTCTCCAGCAAGTTCACCATTAGAACCAAAGGTCTATCAGAGAAGGGTTAACAAGCAGAAAAAGATAGTTGCTGGGAAATGGTGTGGTAAAGTTTGGATGTCCAGTCAGGTACATCCTCTTTTGGCCAAAAGAGATTCTGAAGATGTTGAAGATGAGAAAAGCTTACATGGGTGGGGATTACATGATGAGAAAATAGAGAGATCAGGAAGCATCCCTAAAAGCGAAACTAGTGCCAGAAAATCAGGTAAGAAGCGGAAAATGACTATTGAGAATGGAAGAGCCAGGAAAGGCAGTTTTGCTGAGAGAGATGTGGATTTGGATAATCCAACTGAAGACAAACCTAACCAACAGCTGAGGAGGACTCTTAGAAGTAAGCAAGCCAGGGATATTGAGAGTGAAGGTGCGGATTTGGAAGGGGATTATTCTCCCCCATATCATAGAAAACCTTTAAGTGACCAAACAAATTGCACAGGAAGTGATGCAGTTTCTGATGATTCACTTGATGATAAATTTATTGACAATGATGTGGTTTCAGATGATACAATGGTCTATGATTCTGATTGCCATCAGAGATTTGAACATAGCAGCATGCAAGTTGAAGACATAGAAGATGCAGTTTCTGAGGATTCATTGGATGACGGTTCTCTTCAGCTTCATAGGAAGAATTCTAAAAGCAAGCATGCCAGATACATTAGAAAAGGCAGATGCATTGCTGAGAAAGAGGAAATGATGTCTGATGACCAATTGGAGCCACACAAGAAGAACAAGCAACAGAGGAATCCTAAAAGCAGGCAAGCGAAATACCTTGCAAGAGAAGATGCTATATCACATGGTCAATTGGAAGGACATTGTCGCAAGTATAGAAAGACTCCTAAAGGTAGGCTGGCCAAATATGTAGCAGGGGAAGATGTATCATCTGATGAGCAATTGGAGAATTACAGTCGGAAGCAGCAAACAAGTCTTCCTAAAAGGCAGAAAAACAAAGGTGTATTGACTGATGACCAATTGGAGGACCATTTTCAGAAGCAGCAAAAGAGTGTTTCTAGGCGAAGGCAAAACAAAGGCATTGAAAGAGGGGTTAAAGACGAAATGTCTGATGACCAATTAGAGGATCACGTTCAGAAGCAGCAAACTAGTGTTTCTAAGAGAAGGCGAAACAAACAAATTGAAAGAGATGATGTAATGTCTGATGATGAAATGGAGGATCATTTTCAGAAGCAGCGGAGTAGTATTCCTAGAAATAGGCAAAACAGTAATTCTCATCTGGCCCATAAAACTCCTAAACGAAAGCAAGCGAAATGCGTTGATGATGATGATGGTGATGATGATGATGTAAATTCTGACGATGAAGTGGAAGATGATTCTCAGCAGAAGCAGCAGAGAACTCTTAGAAGTAAGCAATCAAAACCAATGACACTCAAGCAGATGAAGCAAGCTCGCTCTCTCCAAATGAAAAATCAGACATCCCGGTCTGTAAAACGAGGTGCTCAGACACTTAAGAAATTAAAGGCATCTCAGATTCGGAATAAGCAATCTGGTAAATCCAGAGAGTTTAGTTTGAAAATGGAAGAGGGGGAAGAAGGTGGACCTAGCACACGCCTTAGGAAGAGAGCCCCAAAAGTCGAGGAGTCTGATGGAATATCAAAAGAAAAGCAAACCAAAAAGAAAAGGGTGAAGAATGCTACATCTGCAAAGGCAGCTAGCAATGCTAAAGTGAAGGATGAGGAAAATGAATTCCAGTGTGACATTGATGGCTGCACCATGAGTTTTGGGTCAAAACAGGAGCTGATGCATCACAAGAGAAATATATGTCCTGTAAAAGGTTGCGGGAAGAAGTTTTTCTCGCACAAATATCTGGTGCAGCACCGACGAGTTCACGAGGATGACCGCCCATTGAAGTGCCCTTGGAAGGGCTGCAAGATGACTTTCAAGTGGGCATGGGCTCGTACAGAACATATTCGAGTCCACACTGGTGCGCGACCGTATGTATGTGCCGAGCCAGGCTGTGGGCAAACATTCAGATTTGTGTCTGATTTCAGTCGCCATAAGCGTAAGACTGGGCACTCAACAAAGAAGAGTCGTTAA 4701 0.445 MAEANGDVFQWLKSMPLAPEYRPTLTEFQDPIAYIFKIEKEASKYGICKIIPPFPPPPRKVAIANFTRSLTKPDEPNSKPTFTTRQQQIGFCPRRPRPVQRPVWQSGENYTFQEFEAKAKAFEKSYLKKHHLHHQGHRKGGGGGGGSGGLGPLEVETLFWKATVDKPFSVEYANDMPGSAFSRKCREECAAALAESAWNMREISRANGSLLRFMKEEIPGVTSPMVYLAMLFSWFAWHVEDHDLHSLNYLHMGSGKTWYGVPRDAAVAFEDVVRVHGYGSEINPLVTFSTLGEKNTVMSPEVLINAGVPCCRLVQNAGEFVVTFPRAYHTGFSHGFNCGEAANIATPEWLRVAKDAAIRRASVNHSPMVSHFQLLYDLALALCSRIPELFVQDVSQNNDLLQELSKGSEIILLPRSSFDISLCSKLRSGSKQRKVNSRFSLGACNSEEMNSSKGFVSDDLAFSMNRGIKQEGSLSIKDKITSLCERSMISSYDVNGNICSSSSKQLQGDNERESGEGDGSPDKRLFSCVTCGILCFPCVAIVQPRESAARYLMSADCSFFNDWVVGSGVSSKKFIAHEEAAFPEPSMYAGWTEKKTQGLYQDPVQSAQYQLQTAERNYEESLGKSNTALALLASTYGNSSDSEEEHGDSDIVVDGHESPMINATLGGSPSNFQDGCTIPLTGPDSRNDFSHQSFDHSLEKQDCDTSSGFALKNMRAMYTNDTEKTLLGKAMVPNDDKNASVMPQGDQDSSRMHVFCLEHAVEAEQQLRPIGGAHIMLLCHPDFPKIEAEAKLVAEDLGIDYLWKKIEYRHSSKEDEERIQVALDSEEAIPGNGDWCVKLGINLFYSSTLSRSPLYSKQMPYNSVIYYAFGQSSPASSPLEPKVYQRRVNKQKKIVAGKWCGKVWMSSQVHPLLAKRDSEDVEDEKSLHGWGLHDEKIERSGSIPKSETSARKSGKKRKMTIENGRARKGSFAERDVDLDNPTEDKPNQQLRRTLRSKQARDIESEGADLEGDYSPPYHRKPLSDQTNCTGSDAVSDDSLDDKFIDNDVVSDDTMVYDSDCHQRFEHSSMQVEDIEDAVSEDSLDDGSLQLHRKNSKSKHARYIRKGRCIAEKEEMMSDDQLEPHKKNKQQRNPKSRQAKYLAREDAISHGQLEGHCRKYRKTPKGRLAKYVAGEDVSSDEQLENYSRKQQTSLPKRQKNKGVLTDDQLEDHFQKQQKSVSRRRQNKGIERGVKDEMSDDQLEDHVQKQQTSVSKRRRNKQIERDDVMSDDEMEDHFQKQRSSIPRNRQNSNSHLAHKTPKRKQAKCVDDDDGDDDDVNSDDEVEDDSQQKQQRTLRSKQSKPMTLKQMKQARSLQMKNQTSRSVKRGAQTLKKLKASQIRNKQSGKSREFSLKMEEGEEGGPSTRLRKRAPKVEESDGISKEKQTKKKRVKNATSAKAASNAKVKDEENEFQCDIDGCTMSFGSKQELMHHKRNICPVKGCGKKFFSHKYLVQHRRVHEDDRPLKCPWKGCKMTFKWAWARTEHIRVHTGARPYVCAEPGCGQTFRFVSDFSRHKRKTGHSTKKSR 1566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu03g02112 1566 Pfam jmjN domain 19 52 IPR003349 -
Adu03g02112 1566 ProSiteProfiles JmjC domain profile. 192 361 IPR003347 -
Adu03g02112 1566 MobiDBLite consensus disorder prediction 1333 1367 - -
Adu03g02112 1566 MobiDBLite consensus disorder prediction 1309 1323 - -
Adu03g02112 1566 ProSiteProfiles Zinc finger C2H2 type domain profile. 1534 1565 IPR013087 -
Adu03g02112 1566 MobiDBLite consensus disorder prediction 1020 1034 - -
Adu03g02112 1566 MobiDBLite consensus disorder prediction 1112 1128 - -
Adu03g02112 1566 MobiDBLite consensus disorder prediction 1112 1443 - -
Adu03g02112 1566 ProSitePatterns Zinc finger C2H2 type domain signature. 1506 1528 IPR013087 -
Adu03g02112 1566 SUPERFAMILY Clavaminate synthase-like 103 358 - -
Adu03g02112 1566 SMART c2h2final6 1474 1498 IPR013087 -
Adu03g02112 1566 SMART c2h2final6 1451 1473 IPR013087 -
Adu03g02112 1566 SMART c2h2final6 1504 1528 IPR013087 -
Adu03g02112 1566 SMART c2h2final6 1534 1560 IPR013087 -
Adu03g02112 1566 MobiDBLite consensus disorder prediction 1199 1281 - -
Adu03g02112 1566 ProSiteProfiles Zinc finger C2H2 type domain profile. 1474 1503 IPR013087 -
Adu03g02112 1566 MobiDBLite consensus disorder prediction 1386 1424 - -
Adu03g02112 1566 SMART JmjN_1 17 58 IPR003349 -
Adu03g02112 1566 Coils Coil 1430 1450 - -
Adu03g02112 1566 MobiDBLite consensus disorder prediction 932 1039 - -
Adu03g02112 1566 SMART cupin_9 192 361 IPR003347 -
Adu03g02112 1566 SUPERFAMILY beta-beta-alpha zinc fingers 1514 1558 IPR036236 -
Adu03g02112 1566 Gene3D Classic Zinc Finger 1472 1558 - -
Adu03g02112 1566 Gene3D Cupin 11 366 - -
Adu03g02112 1566 ProSiteProfiles JmjN domain profile. 18 59 IPR003349 -
Adu03g02112 1566 ProSiteProfiles Zinc finger C2H2 type domain profile. 1504 1533 IPR013087 -
Adu03g02112 1566 ProSitePatterns Zinc finger C2H2 type domain signature. 1476 1498 IPR013087 -
Adu03g02112 1566 MobiDBLite consensus disorder prediction 1183 1198 - -
Adu03g02112 1566 MobiDBLite consensus disorder prediction 1137 1158 - -
Adu03g02112 1566 PANTHER LYSINE-SPECIFIC DEMETHYLASE 1249 1557 - -
Adu03g02112 1566 PANTHER LYSINE-SPECIFIC DEMETHYLASE 5 1127 - -
Adu03g02112 1566 Pfam JmjC domain, hydroxylase 225 343 IPR003347 -
Adu03g02112 1566 PANTHER LYSINE-SPECIFIC DEMETHYLASE REF6 1249 1557 - -
Adu03g02112 1566 PANTHER LYSINE-SPECIFIC DEMETHYLASE REF6 5 1127 - -
Adu03g02112 1566 SUPERFAMILY beta-beta-alpha zinc fingers 1474 1510 IPR036236 -
Adu03g02112 1566 ProSitePatterns Zinc finger C2H2 type domain signature. 1536 1560 IPR013087 -
Adu03g02112 1566 MobiDBLite consensus disorder prediction 1079 1099 - -
Adu03g02112 1566 MobiDBLite consensus disorder prediction 949 1017 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu03g02112 Adu-Chr3 41717333 41726290 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu03g02112 1187 1565 C2H2 Transcription Factor Family AT3G48430 40.521 3.10e-71 258
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Adu03g02112 JmjC 4.1e-36 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu03g02112 - - adu:107478986 2337.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu03g02112 03 41717333 41726290 Adu03g02112 03 41717333 41726290 ECH